Gene
| Gene Model ID | pfu_aug2.0_11090.1_03083 |
|---|---|
| Locus | scaffold11090.1 : 1 ... 5001 : + |
| To GenomeBrowser | scaffold11090.1:1..5001 |
| Genes list of scaffold | scaffold11090.1 |
| Synonym | pfu_aug1.0_1473.1_65985 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lactase-phlorizin hydrolase-like | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11090.1_03083.t1 | 2 | 1 | Glyco_hydro_1 | 1 | 308 | 0.0 | 342.5 | 0.0 | 0.0 | 315.9 |
| pfu_aug2.0_11090.1_03083.t1 | 2 | 2 | Glyco_hydro_1 | 348 | 373 | 0.0 | 342.5 | 4.4e-12 | 6.5e-08 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11090.1_03083.t1 | gi|390366301|ref|XP_792769.2| | 0.0 | |
| pfu_aug2.0_11090.1_03083.t1 | gi|676446660|ref|XP_009051153.1| | hypothetical protein LOTGIDRAFT_174304 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_11090.1_03083.t1 | gi|161611717|gb|AAI55890.1| | LOC100127291 protein [Xenopus laevis] | 0.0 |
| pfu_aug2.0_11090.1_03083.t1 | gi|171846481|gb|AAI61734.1| | LOC100145766 protein [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_11090.1_03083.t1 | gi|390367537|ref|XP_797100.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11090.1_03083.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11090.1_03083.t1 gtaaagttctggatcacatttaacgagccttgggttgtgtctgttcttggttacgagcaggcaagtatggcccccggtat taccggaaaaggagataaactctatgtcgtcactcataacttactgaaggcacacgctaaggcctaccatctctatgaca agaacttcagaacccaacaaaaaggacaagttggaatcacgcttaatacggattggcaggtaccaatgaatccgaaagat cagaatgatagggatatgtcagatcgcgccatctactttatgtttggttggtttgctgaacccgttattaagggagatta tccgcaagttatgaaagattttattggaaagaaaagtagcgaacagggattggccaagagtagacttccagaatttacag atgaggagaaaaaatatatgaaaaatacctatgatttcctgggaatgaacttttacacatccaataccatcaaatataag aagttctcagccaatgattcttcctacgatcacgacaaagacttggactttggcaaggatccttcgtggctggggtccgg atcatcttggctgaaggtgacaccatttggaatacgacgcatgttgaattgggtcaagtataagtatggcgatataccca tttatattactgaaaacggaatctctgacagaaacggatcactgaatgaccaacaccgaatattttactacaagcattat ataaacaacgtactgaaagccataagggtagacggcgttgacgtccgtggttacacagcatggtcgttgatggataattt tgaatggatgagaggttacacagagagatttggtctccattacgtgaactttaccgatcccaaccgtcccagaactccta aagcttctgccaggtattataagaaacttatagcagacaatggctttatcagagaagatgcaacaaacggaggtcagatg gcgacaggttccccggatttatctacccaattgaacgatccctggcgagatctaccgctccaagatgagttttacttcgg tactttccctgatgggtttgcgtggagttctgctacatcggcttatcaggttgagggtggatggaatgaagacggtatgg attccctctcagagaccaattga |
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Protein
| Protein ID | pfu_aug2.0_11090.1_03083.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11090.1_03083.t1 VKFWITFNEPWVVSVLGYEQASMAPGITGKGDKLYVVTHNLLKAHAKAYHLYDKNFRTQQKGQVGITLNTDWQVPMNPKD QNDRDMSDRAIYFMFGWFAEPVIKGDYPQVMKDFIGKKSSEQGLAKSRLPEFTDEEKKYMKNTYDFLGMNFYTSNTIKYK KFSANDSSYDHDKDLDFGKDPSWLGSGSSWLKVTPFGIRRMLNWVKYKYGDIPIYITENGISDRNGSLNDQHRIFYYKHY INNVLKAIRVDGVDVRGYTAWSLMDNFEWMRGYTERFGLHYVNFTDPNRPRTPKASARYYKKLIADNGFIREDATNGGQM ATGSPDLSTQLNDPWRDLPLQDEFYFGTFPDGFAWSSATSAYQVEGGWNEDGMDSLSETN |
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