Gene
| Gene Model ID | pfu_aug2.0_111.1_03631 |
|---|---|
| Locus | scaffold111.1 : 59198 ... 67175 : - |
| To GenomeBrowser | scaffold111.1:59198..67175 |
| Genes list of scaffold | scaffold111.1 |
| Synonym | pfu_aug1.0_21058.1_54728 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| electron transfer flavoprotein subunit mitochondrial-like | GO:0009055 GO:0009887 GO:0031998 GO:0050660 GO:0070584 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_111.1_03631.t1 | 1 | 1 | ETF | 24 | 176 | 5.8e-37 | 126.9 | 1.8e-40 | 9.0e-37 | 126.3 |
| pfu_aug2.0_111.1_03631.t1 | 2 | 1 | ETF_alpha | 50 | 77 | 4.8e-38 | 128.6 | 0.96 | 4700.0 | -2.8 |
| pfu_aug2.0_111.1_03631.t1 | 2 | 2 | ETF_alpha | 212 | 296 | 4.8e-38 | 128.6 | 1.79997e-41 | 8.8e-38 | 127.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_111.1_03631.t1 | gi|676428195|ref|XP_009045195.1| | hypothetical protein LOTGIDRAFT_224100 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_111.1_03631.t1 | gi|524869199|ref|XP_005091396.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_111.1_03631.t1 | gi|573881536|ref|XP_006628962.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_111.1_03631.t1 | gi|524869197|ref|XP_005091395.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_111.1_03631.t1 | gi|383849593|ref|XP_003700429.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial [Megachile rotundata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_111.1_03631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03631.t1 atgttcagcagaaagttacacccaaaaaatctcaataagacgatatgtctgttgagaagattcaatggtacgttagttgt agcagaacacaccaatgagaagcttgtacccataactttgaacacaatcacagctgcctccaagctaggggaggtcactt gtctggtagccggttctcagtgtgctaaggtagcagaagaaatttccaaagttcaaggtgtaaaaaagattctccttgca gataatgaagtttataaaggctttcttccagaatcgctgactccattactagtcgctgcacagaatcagttcaaatttac acatattctagctggtgcgactgctatgggaaagagtctgatacctagagttgctgccaagctagacgtctcacctgttt ctgatattattggcataaatgatacagacacctttgtcagaacaatctatgcaggtaatgccattcagacagtgaagtca aaggactcggttaaactgattaccgtcagaggtactgcatttgaagctgcccaggtagagggaggaagtggggctacaga gcaagctccaacagttgatgtcaagaatgaattatcagagtttgtttcacaagagttgaccaagagtgaccgtccagaat tgaccagtgccaggacagttgtgtcaggaggtagaggaatgaagaatggtgataactttaagctgttgtatgaccttgct gacaagatgaatgccgcagtaggtgcctcaagagcagctgtagatgctggatttgtacctaatgacatgcaggtcggaca aacaggaaaaattgtagctccagatctgtacatagctgtaggtatttctggtgctatccagcatttggcaggtatgaagg acagtaaagtgatagtagccatcaataaagatccagaggcaccaatcttccaagtcgccgactatggactagtggctgat ctcttcaaggctgtgccagaaatgaccgatgctatgaacaaatga |
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Protein
| Protein ID | pfu_aug2.0_111.1_03631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03631.t1 MFSRKLHPKNLNKTICLLRRFNGTLVVAEHTNEKLVPITLNTITAASKLGEVTCLVAGSQCAKVAEEISKVQGVKKILLA DNEVYKGFLPESLTPLLVAAQNQFKFTHILAGATAMGKSLIPRVAAKLDVSPVSDIIGINDTDTFVRTIYAGNAIQTVKS KDSVKLITVRGTAFEAAQVEGGSGATEQAPTVDVKNELSEFVSQELTKSDRPELTSARTVVSGGRGMKNGDNFKLLYDLA DKMNAAVGASRAAVDAGFVPNDMQVGQTGKIVAPDLYIAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFQVADYGLVAD LFKAVPEMTDAMNK |
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