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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_111.1_03633
Locus scaffold111.1 : 116799 ... 118025 : -
To GenomeBrowser scaffold111.1:116799..118025
Genes list of scaffold scaffold111.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_111.1_03633.t1 1 1 7tm_1 13 159 1.5e-07 30.7 8.5e-11 2.5e-07 30.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_111.1_03633.t1 gi|524902943|ref|XP_005107691.1| PREDICTED: P17/29C-like protein DDB_G0287399-like [Aplysia californica] 3.0e-07

Transcript
Transcript IDpfu_aug2.0_111.1_03633.t1
Definition-
>pfu_aug2.0_111.1_03633.t1
atggatataaccggcgcagacatagttattcctggtgtgctctatttcaatttcattctaagtggtgcagtgattataac
cctcgtggttctgtatggatttgtagggaaagtaatctatcaccataacaaacgaataaacgaatctcgttctctatcaa
tggatgtccaaaaggaaagagatcaaagtgatcgtcgcaaagagaacggcaacgaggaaacgagtaatttcgaaaatacc
tgctcgattgtttccatctgtacagtcaggcaaatgagaatcataaatcgagcaacaattatgttcatgattgtgactct
aattaccatcttgtcctatattccactttggatatttgtatttttggatgttttggatcctacgaggtggtttattatgc
ctgaagctgagctgcatttcttcttgttcctaagagctttgagtgtcgccagttatctatcaaaccctataatatatgct
tactacgacaggaagtttagaagcatgtgtgttcaaatcctgtttggctactgcaaaaagaaaaggccgaactga

Protein
Protein IDpfu_aug2.0_111.1_03633.t1
Definition-
>pfu_aug2.0_111.1_03633.t1
MDITGADIVIPGVLYFNFILSGAVIITLVVLYGFVGKVIYHHNKRINESRSLSMDVQKERDQSDRRKENGNEETSNFENT
CSIVSICTVRQMRIINRATIMFMIVTLITILSYIPLWIFVFLDVLDPTRWFIMPEAELHFFLFLRALSVASYLSNPIIYA
YYDRKFRSMCVQILFGYCKKKRPN

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