Gene
| Gene Model ID | pfu_aug2.0_111.1_03635 |
|---|---|
| Locus | scaffold111.1 : 145806 ... 154835 : - |
| To GenomeBrowser | scaffold111.1:145806..154835 |
| Genes list of scaffold | scaffold111.1 |
| Synonym | pfu_aug1.0_36623.1_48243 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_111.1_03635.t1 | 1 | 1 | adh_short | 61 | 222 | 8.6e-27 | 94.0 | 5.5e-30 | 1.2e-26 | 93.6 |
| pfu_aug2.0_111.1_03635.t1 | 1 | 1 | KR | 62 | 220 | 6.4e-09 | 35.7 | 4.6e-12 | 9.8e-09 | 35.1 |
| pfu_aug2.0_111.1_03635.t1 | 1 | 1 | adh_short_C2 | 67 | 239 | 9.6e-13 | 48.4 | 6.3e-16 | 1.3e-12 | 47.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_111.1_03635.t1 | gi|507927833|ref|XP_004675171.1| | 0.0 | |
| pfu_aug2.0_111.1_03635.t1 | gi|348582768|ref|XP_003477148.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like isoform X1 [Cavia porcellus] | 0.0 |
| pfu_aug2.0_111.1_03635.t1 | gi|676429092|ref|XP_009045487.1| | hypothetical protein LOTGIDRAFT_109862 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_111.1_03635.t1 | gi|514474831|ref|XP_005006943.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like isoform X2 [Cavia porcellus] | 0.0 |
| pfu_aug2.0_111.1_03635.t1 | gi|694905894|ref|XP_009445404.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X3 [Pan troglodytes] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_111.1_03635.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03635.t1 atggataaagtgctggacctgaaatggattgaggcagcgttttactctggcctcgtagcctttgtattatacattatata ttcatacttcataatcttatctttgggatttaccttatacttggcatgtatgatatatgccaaaaagaacaaattagtac ttgacatcggtaaaaggggcatcttaatcactggctgtgatacagggttcggatatcatcttgcaaagaatttggctttg gatggatatacagtgtttgctggggttttgcaaatagagggacatggcgctaagcagctacgagcactaaagctgaaatc tctatatgtcataaagctggatgtaacatcagatgaagacgtcaaacaagcttttaaagaagtagaatcaagaaagcacg gtttatggggaatagttaacaatgctggttttaacattttcggagacgtcgaacatgcaaccatagaacaatacaagaca tgtgcagaagtgaatctatatggacctatcaggatcataaaaaaattccttcccttggtacggaagagtaaaggaagagt cgttaacgtgtccagtgtcttaggactgtatagtcgaccgggctggtcggtttaccatacaactaaacatgccattgaga ccctaaccgatagtcttcgactggaaatggtgaaatttggagtgaaggtggccgtagtagaaccgggaacctacgacggc gcaacctcatgtagatcgcctgaaaggatatctttcctcacatctgagattgacaaacaattgaatatggctgacgagga agtgcggaaaacatatgacaaggatcacttctataagaatgttaatatggaatttccagcaactggtacgctctccccca aacctgtactggactccatagaagacgcattatttaatgtgtcaccctctccaaggtactttgttcctggaggctttggc ttcattgacattccatcgagaggacaggtggtcggggccctgtcttctctaatgagatttggacatggcccgtcatggag tcccgttgtcacagtcagtcagagtgcaagtctcaaggatgtgctggtgcaagactgtagattggtcaagtaccaagact ag |
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Protein
| Protein ID | pfu_aug2.0_111.1_03635.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03635.t1 MDKVLDLKWIEAAFYSGLVAFVLYIIYSYFIILSLGFTLYLACMIYAKKNKLVLDIGKRGILITGCDTGFGYHLAKNLAL DGYTVFAGVLQIEGHGAKQLRALKLKSLYVIKLDVTSDEDVKQAFKEVESRKHGLWGIVNNAGFNIFGDVEHATIEQYKT CAEVNLYGPIRIIKKFLPLVRKSKGRVVNVSSVLGLYSRPGWSVYHTTKHAIETLTDSLRLEMVKFGVKVAVVEPGTYDG ATSCRSPERISFLTSEIDKQLNMADEEVRKTYDKDHFYKNVNMEFPATGTLSPKPVLDSIEDALFNVSPSPRYFVPGGFG FIDIPSRGQVVGALSSLMRFGHGPSWSPVVTVSQSASLKDVLVQDCRLVKYQD |
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