Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_111.1_03639
Locus scaffold111.1 : 275930 ... 287568 : +
To GenomeBrowser scaffold111.1:275930..287568
Genes list of scaffold scaffold111.1
Synonym pfu_aug1.0_3871.1_52112

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_111.1_03639.t1 gi|676464438|ref|XP_009056922.1| hypothetical protein LOTGIDRAFT_162667 [Lottia gigantea] 0.0
pfu_aug2.0_111.1_03639.t1 gi|291225539|ref|XP_002732759.1| PREDICTED: HAUS augmin-like complex subunit 1-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_111.1_03639.t1 gi|390343108|ref|XP_003725805.1| PREDICTED: HAUS augmin-like complex subunit 1 [Strongylocentrotus purpuratus] 0.0
pfu_aug2.0_111.1_03639.t1 gi|591360637|ref|XP_007055237.1| PREDICTED: HAUS augmin-like complex subunit 1 [Chelonia mydas] 0.0
pfu_aug2.0_111.1_03639.t1 gi|641755754|ref|XP_008164276.1| PREDICTED: HAUS augmin-like complex subunit 1 [Chrysemys picta bellii] 0.0

Transcript
Transcript IDpfu_aug2.0_111.1_03639.t1
Definition-
>pfu_aug2.0_111.1_03639.t1
atgaatgaacaacataaagaggttcagctatggttggagaaggtgtttggaggtagcgatatccctgcttttgaggtgaa
caaaactacgataggaattctgtatgatctgatgagaaagaatgagagggctgacagagatactcagctgattatagatg
tttataggcaggaagctcgagaatataggtctgaagccaatcgcctgcagagcatcctaaagcatgttaaccttacacta
gacagtttgtccaagccaggggttgccaatattaggaccttagctacattggctttacacctacagactaaagatgcttc
agattcaagttacatgttggcaatgtcaaagctgcaggatgacctatttaggatatcacaggaaaggaaggctgaacaaa
tcaaaatggacaaactctcagagaaatctagggcagcactacttaaacatagtaatttacagagatctctagatatgttc
agacgagaggaagaagaacaaattacagggacaacgaaaaaggccaaggaactgggatttgttcatcagaaatcagagga
atacagagacaagattaaacgcatggagaatcatctagggaaggtaggagttgatccatccatttatcacggagaattag
tcaagaagtcagaggaattggaaaccataaagaaggaacttgctcctctacaggcaaaactccagttatatcatagcctt
ccacctgatgttccacttaccaaagtgaaagttgaagaaatgcggcagaaacttgcggcacttgaagctgatttccatgc
taaaattgatgttatgcacatgtga

Protein
Protein IDpfu_aug2.0_111.1_03639.t1
Definition-
>pfu_aug2.0_111.1_03639.t1
MNEQHKEVQLWLEKVFGGSDIPAFEVNKTTIGILYDLMRKNERADRDTQLIIDVYRQEAREYRSEANRLQSILKHVNLTL
DSLSKPGVANIRTLATLALHLQTKDASDSSYMLAMSKLQDDLFRISQERKAEQIKMDKLSEKSRAALLKHSNLQRSLDMF
RREEEEQITGTTKKAKELGFVHQKSEEYRDKIKRMENHLGKVGVDPSIYHGELVKKSEELETIKKELAPLQAKLQLYHSL
PPDVPLTKVKVEEMRQKLAALEADFHAKIDVMHM

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495