Gene
| Gene Model ID | pfu_aug2.0_111.1_03647 |
|---|---|
| Locus | scaffold111.1 : 404415 ... 410346 : + |
| To GenomeBrowser | scaffold111.1:404415..410346 |
| Genes list of scaffold | scaffold111.1 |
| Synonym | pfu_aug1.0_2075.1_66189 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adamts-like protein 1 isoform x4 | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_111.1_03647.t1 | 10 | 1 | TSP_1 | 3 | 30 | 4.9e-22 | 77.7 | 6.4e-06 | 0.024 | 14.7 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 2 | TSP_1 | 62 | 108 | 4.9e-22 | 77.7 | 2.5e-10 | 9.3e-07 | 28.8 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 3 | TSP_1 | 161 | 194 | 4.9e-22 | 77.7 | 4.1e-07 | 0.0015 | 18.5 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 4 | TSP_1 | 229 | 236 | 4.9e-22 | 77.7 | 1.4 | 5200.0 | -2.4 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 5 | TSP_1 | 248 | 260 | 4.9e-22 | 77.7 | 4.0 | 15000.0 | -3.9 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 6 | TSP_1 | 296 | 319 | 4.9e-22 | 77.7 | 6.6e-07 | 0.0024 | 17.9 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 7 | TSP_1 | 358 | 412 | 4.9e-22 | 77.7 | 7.7e-08 | 0.00028 | 20.9 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 8 | TSP_1 | 570 | 591 | 4.9e-22 | 77.7 | 2.6e-07 | 0.00098 | 19.1 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 9 | TSP_1 | 630 | 666 | 4.9e-22 | 77.7 | 0.022 | 82.0 | 3.4 |
| pfu_aug2.0_111.1_03647.t1 | 1 | 1 | PLAC | 708 | 737 | 7.5e-06 | 26.1 | 1.7e-08 | 6.5e-05 | 23.1 |
| pfu_aug2.0_111.1_03647.t1 | 10 | 10 | TSP_1 | 732 | 741 | 4.9e-22 | 77.7 | 0.94 | 3500.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_111.1_03647.t1 | gi|676439266|ref|XP_009048798.1| | hypothetical protein LOTGIDRAFT_157969 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_111.1_03647.t1 | gi|676421303|ref|XP_009043807.1| | hypothetical protein LOTGIDRAFT_152088 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_111.1_03647.t1 | gi|642929489|ref|XP_008195859.1| | PREDICTED: ADAMTS-like protein 1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_111.1_03647.t1 | gi|641668874|ref|XP_008184604.1| | PREDICTED: ADAMTS-like protein 1 isoform X4 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_111.1_03647.t1 | gi|328715229|ref|XP_003245569.1| | PREDICTED: ADAMTS-like protein 1 isoform X3 [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_111.1_03647.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03647.t1 atggttggaccttggcgagattgtacacagacatgtgggggaggattctcatggaggatcgtaagatgtgtacaaacatt cctagatggcacgcaacaaatcgttgatggcgaattctgctccaagcatgcgccgtccaggcggaagtcgtgtaataatc aaatctgcccgacatggtacgccggacagtggacgccgtgtggagtcacgtgtggtagcggcatacagacaagggatgtt gtttgtcgccatgttggggatgagtactgtgataagaaggtccgacccagaactctcaaaaactgctcaactcacattcc ctgttttgaccaaaatgatgccggttatgctgaattttaccgtcaagatattcaagaagtcatgactggtgacaaagacg aaagaacatcagataaacagtcggttatcactgatggcagatttgcaaaagaatacatcacgtctcctcgatttgtagta agtaaatggggaccttgcagtgcatcttgtggacaaggtacaaagtggcgatttgtccgctgtaaagtgtacctgccatt ttcgaacaaggattcgctgacggacctcgcagattcagaatgtagcggcgacaagccagtagagagtttattatgtgatt cagagccatgttatgaccagtacgagtacagggccattggcttcaccgcctgtagtcgtagctgtttaggagattctaat caacatcgtatacttgatttcaaaggtgtccaggagactatagtcagatgtgtccacaaggaaaacggtacagtcatgga agacttcttatgtggcgacaaaagtcctccgcctatcgccaggagaatatgtaatgacatcatttgtccacaaagatgga aagttagtgattttggagcatgctctgtaacttgcggaagtggcaccatgattagaggcgttgaatgtatacaagaattt gcttccggttaccagaatgttattcgacttccggattacatgtgtgagcagccagtacccgcacgggcacggatctgctt ccgggaggagtgtaaagcggaatggtcagtcggaaattggtctgagtgtacagcgacgtgtggatcaggtatcaccattc gggatgtgttttgcaccagagtgttatcccttggcttaaccatgaacgtgacattgaaagaatgtgacctttctctaaag ccagaagcaacgaagatgtgcaacaaccggaagtgtccaaaaccgaagatcaaagcgctggacatcaagtttttccagtt agacaaaatgaagaaagtaaaattaacgatagggatgaatgcagacatcctcccagacacaactattgttctgaaatgtc caactagaggactaaatccgtatcatatacagtggtataaaaatggcgttcttattgaacccacgataggcaaaagaatc aaagtaaataataaaatgcatttgaaaataaagcggagtttgccgatcgttgacgatgggatttattcctgcaaagtggg atcattaatggcaagttccaccatttcatatagtaatgtatatgacatattttccgcaactttgatgcggaaacgtttta tttccggttccggtcccgcaaaattgatacaacgtgacttgggtttaggaagtctcacacaaagagaccccgtgtccaga aggcgacgaccgttgcgtcttgttgaaggaccctggaacccttgctccgctacgtgtgggggaggactccaatctagaaa tgttagctgtgaaattataactcaggactattatgaagtatttccggtacggtactgtacaaaagcaggatacatggaac ctactcttattcagagctgtaatactcatccttgtgttgaatggaaaacaagcaattggtcagagtgttctctacagaca tgcgtacgcaacatgttctcttaccagagccgtgacgtagactgtgtcatgcaacacagcaatataactctcaatacctc agagtgtgatcagctaggggccatgccaccctcggagaaagaatgcgtcaatgataattgtatggccttatggaatgtgt ccaagtggacagagacatataattttgcttccatttcagcctgcatcgacaaatctaaatattgcagcgttgtaaaatta cttgacttttgtcgcctggtgaacttttcgaggaattgttgtgtatcgtgcgggggacagtcctctggggacaataaata cgcacggaggaagaggaggaaactcgctgtttga |
|
Protein
| Protein ID | pfu_aug2.0_111.1_03647.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03647.t1 MVGPWRDCTQTCGGGFSWRIVRCVQTFLDGTQQIVDGEFCSKHAPSRRKSCNNQICPTWYAGQWTPCGVTCGSGIQTRDV VCRHVGDEYCDKKVRPRTLKNCSTHIPCFDQNDAGYAEFYRQDIQEVMTGDKDERTSDKQSVITDGRFAKEYITSPRFVV SKWGPCSASCGQGTKWRFVRCKVYLPFSNKDSLTDLADSECSGDKPVESLLCDSEPCYDQYEYRAIGFTACSRSCLGDSN QHRILDFKGVQETIVRCVHKENGTVMEDFLCGDKSPPPIARRICNDIICPQRWKVSDFGACSVTCGSGTMIRGVECIQEF ASGYQNVIRLPDYMCEQPVPARARICFREECKAEWSVGNWSECTATCGSGITIRDVFCTRVLSLGLTMNVTLKECDLSLK PEATKMCNNRKCPKPKIKALDIKFFQLDKMKKVKLTIGMNADILPDTTIVLKCPTRGLNPYHIQWYKNGVLIEPTIGKRI KVNNKMHLKIKRSLPIVDDGIYSCKVGSLMASSTISYSNVYDIFSATLMRKRFISGSGPAKLIQRDLGLGSLTQRDPVSR RRRPLRLVEGPWNPCSATCGGGLQSRNVSCEIITQDYYEVFPVRYCTKAGYMEPTLIQSCNTHPCVEWKTSNWSECSLQT CVRNMFSYQSRDVDCVMQHSNITLNTSECDQLGAMPPSEKECVNDNCMALWNVSKWTETYNFASISACIDKSKYCSVVKL LDFCRLVNFSRNCCVSCGGQSSGDNKYARRKRRKLAV |
|