Gene
| Gene Model ID | pfu_aug2.0_111.1_03651 |
|---|---|
| Locus | scaffold111.1 : 444655 ... 450588 : + |
| To GenomeBrowser | scaffold111.1:444655..450588 |
| Genes list of scaffold | scaffold111.1 |
| Synonym | pfu_aug1.0_10660.1_10174 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycogen synthase kinase-3 beta isoform x4 | GO:0004674 GO:0005524 GO:0006468 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_111.1_03651.t1 | 2 | 1 | Kinase-like | 53 | 101 | 4.5e-06 | 25.8 | 0.0024 | 5.8 | 5.7 |
| pfu_aug2.0_111.1_03651.t1 | 1 | 1 | Pkinase | 55 | 203 | 1.9e-36 | 125.5 | 9.6e-40 | 2.4e-36 | 125.2 |
| pfu_aug2.0_111.1_03651.t1 | 1 | 1 | Pkinase_Tyr | 58 | 200 | 1.2e-18 | 67.1 | 6.7e-22 | 1.7e-18 | 66.6 |
| pfu_aug2.0_111.1_03651.t1 | 2 | 2 | Kinase-like | 152 | 200 | 4.5e-06 | 25.8 | 2.5e-07 | 0.00061 | 18.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_111.1_03651.t1 | gi|676434761|ref|XP_009047335.1| | hypothetical protein LOTGIDRAFT_185982 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_111.1_03651.t1 | gi|524903389|ref|XP_005107895.1| | PREDICTED: glycogen synthase kinase-3 beta isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_111.1_03651.t1 | gi|297186095|gb|ADI24335.1| | glycogen synthase kinase 3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_111.1_03651.t1 | gi|642920087|ref|XP_008192199.1| | PREDICTED: glycogen synthase kinase-3 beta isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_111.1_03651.t1 | gi|645029972|ref|XP_008208522.1| | PREDICTED: glycogen synthase kinase-3 beta isoform X4 [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_111.1_03651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03651.t1 atgagcggacgtcctaggaccacatcctttgctgaaggtggtaaacaaggttctacggctcaatttggcggaatgagaac gacaaacagggacggtaatcgggtgaccactgtgcaagccacagctgggtctggatcggacagaccacaggaggtgtctt acacagatgctaaagttataggcaatgggtcgtttggggtcgtctaccaagctaaactagtcgatactaatgaactggtt gcaattaaaaaagttttacaagataaacgttttaagaaccgtgaacttcaaataatgaggaaactagaacatgtcaatat agtcaagttaaaatacttcttttactcagcaggggaaaagaaagatgaagtgttcctaaatttggttttagagtatgtac cagagactgtgtacagggtggctaggcattacagtaaatccaaacaaaccataccaatgttatatattaagctttatatg tatcaactgtttaggagtttagcatatattcatcatgtaggagtgtgtcatagagatataaaaccacagaatctgctatt ggacccggaaactggtgttcttaaactctgtgatttcggcagatgtatggtcggcgggttgtgtcttagccgagttactc ctgggtcaaccaatcttcccaggagacagtggggtggatcaattggtggagataatcaaagtgctaggcacgcccactcg agaacagatacgggaaatgaaccctaa |
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Protein
| Protein ID | pfu_aug2.0_111.1_03651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_111.1_03651.t1 MSGRPRTTSFAEGGKQGSTAQFGGMRTTNRDGNRVTTVQATAGSGSDRPQEVSYTDAKVIGNGSFGVVYQAKLVDTNELV AIKKVLQDKRFKNRELQIMRKLEHVNIVKLKYFFYSAGEKKDEVFLNLVLEYVPETVYRVARHYSKSKQTIPMLYIKLYM YQLFRSLAYIHHVGVCHRDIKPQNLLLDPETGVLKLCDFGRCMVGGLCLSRVTPGSTNLPRRQWGGSIGGDNQSARHAHS RTDTGNEP |
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