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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_111.1_03654
Locus scaffold111.1 : 499595 ... 510574 : -
To GenomeBrowser scaffold111.1:499595..510574
Genes list of scaffold scaffold111.1
Synonym pfu_aug1.0_15569.1_18230

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_111.1_03654.t1 8 1 Ig_3 2 26 9.2e-24 83.7 7.4 12000.0 -3.2
pfu_aug2.0_111.1_03654.t1 6 1 I-set 4 33 1.4e-26 92.1 0.0019 3.2 7.6
pfu_aug2.0_111.1_03654.t1 7 1 V-set 10 42 2.6e-15 56.3 0.0044 7.3 6.5
pfu_aug2.0_111.1_03654.t1 8 1 ig 11 28 3.6e-15 55.8 3.2 5300.0 -2.4
pfu_aug2.0_111.1_03654.t1 7 1 Ig_2 14 28 2.2e-29 101.3 2.2 3700.0 -1.9
pfu_aug2.0_111.1_03654.t1 8 2 Ig_3 52 106 9.2e-24 83.7 0.011 19.0 5.8
pfu_aug2.0_111.1_03654.t1 7 2 Ig_2 56 99 2.2e-29 101.3 0.0064 11.0 6.2
pfu_aug2.0_111.1_03654.t1 7 2 V-set 57 73 2.6e-15 56.3 0.83 1400.0 -0.8
pfu_aug2.0_111.1_03654.t1 5 1 C2-set_2 58 79 2.8e-14 52.7 0.63 1000.0 -0.4
pfu_aug2.0_111.1_03654.t1 8 2 ig 63 110 3.6e-15 55.8 0.00053 0.87 9.7
pfu_aug2.0_111.1_03654.t1 7 3 Ig_2 100 185 2.2e-29 101.3 5.2e-08 8.5e-05 22.6
pfu_aug2.0_111.1_03654.t1 8 3 Ig_3 100 170 9.2e-24 83.7 5.0e-08 8.2e-05 23.0
pfu_aug2.0_111.1_03654.t1 7 3 V-set 102 175 2.6e-15 56.3 4.6e-08 7.6e-05 22.5
pfu_aug2.0_111.1_03654.t1 6 2 I-set 104 183 1.4e-26 92.1 6.2e-08 0.0001 22.0
pfu_aug2.0_111.1_03654.t1 5 2 C2-set_2 108 141 2.8e-14 52.7 0.13 210.0 1.8
pfu_aug2.0_111.1_03654.t1 8 3 ig 113 168 3.6e-15 55.8 6.6e-06 0.011 15.8
pfu_aug2.0_111.1_03654.t1 6 3 I-set 193 284 1.4e-26 92.1 5.1e-06 0.0084 15.9
pfu_aug2.0_111.1_03654.t1 5 3 C2-set_2 193 270 2.8e-14 52.7 1.7e-11 2.8e-08 33.5
pfu_aug2.0_111.1_03654.t1 8 4 Ig_3 197 270 9.2e-24 83.7 2.8e-05 0.046 14.2
pfu_aug2.0_111.1_03654.t1 7 4 Ig_2 198 279 2.2e-29 101.3 1.5e-07 0.00024 21.1
pfu_aug2.0_111.1_03654.t1 7 4 V-set 198 226 2.6e-15 56.3 0.029 49.0 3.8
pfu_aug2.0_111.1_03654.t1 8 4 ig 204 227 3.6e-15 55.8 0.0005 0.83 9.8
pfu_aug2.0_111.1_03654.t1 8 5 ig 263 271 3.6e-15 55.8 7.5 12000.0 -3.6
pfu_aug2.0_111.1_03654.t1 8 5 Ig_3 287 356 9.2e-24 83.7 4.9e-10 8.1e-07 29.4
pfu_aug2.0_111.1_03654.t1 7 5 Ig_2 291 369 2.2e-29 101.3 1.6e-12 2.6e-09 37.0
pfu_aug2.0_111.1_03654.t1 5 4 C2-set_2 291 329 2.8e-14 52.7 0.001 1.7 8.5
pfu_aug2.0_111.1_03654.t1 8 6 ig 305 354 3.6e-15 55.8 0.0016 2.7 8.1
pfu_aug2.0_111.1_03654.t1 6 4 I-set 322 368 1.4e-26 92.1 0.00011 0.19 11.6
pfu_aug2.0_111.1_03654.t1 7 5 V-set 340 356 2.6e-15 56.3 0.14 230.0 1.7
pfu_aug2.0_111.1_03654.t1 8 6 Ig_3 374 441 9.2e-24 83.7 9.4e-10 1.5e-06 28.5
pfu_aug2.0_111.1_03654.t1 5 5 C2-set_2 375 434 2.8e-14 52.7 0.00054 0.89 9.4
pfu_aug2.0_111.1_03654.t1 7 6 Ig_2 379 448 2.2e-29 101.3 7.5e-08 0.00012 22.0
pfu_aug2.0_111.1_03654.t1 6 5 I-set 380 443 1.4e-26 92.1 0.00028 0.47 10.3
pfu_aug2.0_111.1_03654.t1 7 6 V-set 385 442 2.6e-15 56.3 9.5e-07 0.0016 18.3
pfu_aug2.0_111.1_03654.t1 8 7 ig 387 439 3.6e-15 55.8 2.9e-07 0.00047 20.2
pfu_aug2.0_111.1_03654.t1 6 6 I-set 477 557 1.4e-26 92.1 1.8e-07 0.00029 20.6
pfu_aug2.0_111.1_03654.t1 8 7 Ig_3 486 552 9.2e-24 83.7 0.031 52.0 4.4
pfu_aug2.0_111.1_03654.t1 7 7 Ig_2 491 563 2.2e-29 101.3 0.16 270.0 1.7
pfu_aug2.0_111.1_03654.t1 8 8 ig 508 544 3.6e-15 55.8 1.6 2600.0 -1.4
pfu_aug2.0_111.1_03654.t1 7 7 V-set 535 556 2.6e-15 56.3 0.12 200.0 1.8
pfu_aug2.0_111.1_03654.t1 8 8 Ig_3 579 594 9.2e-24 83.7 4.1 6700.0 -2.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_111.1_03654.t1 gi|498989784|ref|XP_004531694.1| 4.0e-30
pfu_aug2.0_111.1_03654.t1 gi|751780768|ref|XP_011199520.1| PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 [Bactrocera dorsalis] 9.0e-30
pfu_aug2.0_111.1_03654.t1 gi|157104617|ref|XP_001648489.1| AAEL004133-PA [Aedes aegypti] 2.0e-29
pfu_aug2.0_111.1_03654.t1 gi|755895075|ref|XP_011295452.1| PREDICTED: uncharacterized protein LOC101896034, partial [Musca domestica] 2.0e-29
pfu_aug2.0_111.1_03654.t1 gi|751473772|ref|XP_011192255.1| PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 [Bactrocera cucurbitae] 3.0e-29

Transcript
Transcript IDpfu_aug2.0_111.1_03654.t1
Definition-
>pfu_aug2.0_111.1_03654.t1
atgaattgtacagtagaaagagctaccaatacagttaaattctgtcttaaagatatcacgaaagctgatgctggtgccta
tacaattgcaacagtcagttcaaattctcaaagtagaattggacaagtgtatgtaatggataagccatcattgcctacga
tatcgcagacgtcagccgtagagctacaacatgttactttaacatgcttctcaacatccacatcagcaccatcacctact
ggactggctatgttatacacatggacagtggatggaggttctcctgtagaccagaggccagttgtatctacaagcggcaa
tgtgacggcaaaggagggttctacagtcaatattacctgcatagtccttgaagcaaatccctctatgataatacgctaca
gttggtacaatagtactgatccttctgttattttaacgataaatcgaacacttactttgacgccattgcggagatatgat
tatggattgtacaactgtaaggctgcgaacagtgtcggaccgtccatgtcacctgcatctgtggccgtcactgtacaatt
tggtcctgattccaatacaatcagtggaaacaaaacagtgaacgaaaactccatgttaaagctaacttgtactgcaagta
cttcatatccccaatctatactgacgtggttgaaggatggtatccccttcagtgttaatagtcccgtaaaaacccatgat
ggattgtacagagggataataacaagtcaagatttcaccttaatggtaaagaaacaggataagggagcaaacatcacatg
tgtggcctcaacaatacatagagtggagacgagtaccgtatttctcaatgtcagatataagccaacagtccaaatcactc
ctcccaggatgacagtaattgtcgatgagatggacgtagttgtgacctgtagtgttactgatgctaatccgtatccactt
tcgttcgtctggatgaggagcactactgtcatcagtgttcatcagaactattccatccctgttgtcaacagagagaacgc
tggtttgtacagctgcatggcaactaacgtagccggaacatcagactcagcgaatatgtctgttgatgtcctttaccctc
caaaaatagccaacatgtcaaagcaaacaccggaggaagggtcaagtataacgttaccttgtatcgtaacttcatcaaac
cctccacctcaacgcatctactggactcggagaaaagatccttcgttcatagtgaatggaagtatcttatcaattacaag
tatgaagagaaccgatacggatgtgtacatctgtaatgcagaaagtataatggtatcatcaacaggcaagactgttactt
cagtatccaaaatggatgttataatcgacgtattatgtcctccacaaccattaaatagtacgttagcgatggaacgagtt
gttgttggacaagataattccttgaacattacatttcagttcactggaagtcctcttccaaccgtttctttgatttttga
ctttaacaataactcctcgattgaaaataatcctttgattcaagtggaggaattcgacataggaaaatacaaaacgtcaa
ttctgaagaacttgacgaacagtgattttggattgtatgttgttcagttacagaattccctgggacaaaagttggttcct
ttccgtgtaacgcagcaaggaaaaccggattccccaaataatttattcctcgactgctctgaaccaaacaaagcaacact
gtactggactcctggattcaacggccttgctaaaactgagagtggataccaaacatttcagatactgtataagagtgaac
cagacgctgacttcataacagatacaaatgcaataaaggacaacggtggcagagtaagtggaattgttggaaaccttgca
tctaagaattggacattttcgttattggcaaagaatgcttttggcattacagctgcagattcttccgctttttgctctgt
aaatgctgcaaaaagtgatgaaggtagattattattccatggtggaagctttggtgctggtataggtctaacggtcggtg
tcatcgcaatcccccttacagtaatggttgttatatggcgtaaaagagctgacatagatgatagtggaagaatgtacgaa
gacataggcaagattgagattcaggaatcaaactatagccaacttggtactaccgatgatacactagagtatgtaaatac
atcgttgagtacagaacgaggggagagttag

Protein
Protein IDpfu_aug2.0_111.1_03654.t1
Definition-
>pfu_aug2.0_111.1_03654.t1
MNCTVERATNTVKFCLKDITKADAGAYTIATVSSNSQSRIGQVYVMDKPSLPTISQTSAVELQHVTLTCFSTSTSAPSPT
GLAMLYTWTVDGGSPVDQRPVVSTSGNVTAKEGSTVNITCIVLEANPSMIIRYSWYNSTDPSVILTINRTLTLTPLRRYD
YGLYNCKAANSVGPSMSPASVAVTVQFGPDSNTISGNKTVNENSMLKLTCTASTSYPQSILTWLKDGIPFSVNSPVKTHD
GLYRGIITSQDFTLMVKKQDKGANITCVASTIHRVETSTVFLNVRYKPTVQITPPRMTVIVDEMDVVVTCSVTDANPYPL
SFVWMRSTTVISVHQNYSIPVVNRENAGLYSCMATNVAGTSDSANMSVDVLYPPKIANMSKQTPEEGSSITLPCIVTSSN
PPPQRIYWTRRKDPSFIVNGSILSITSMKRTDTDVYICNAESIMVSSTGKTVTSVSKMDVIIDVLCPPQPLNSTLAMERV
VVGQDNSLNITFQFTGSPLPTVSLIFDFNNNSSIENNPLIQVEEFDIGKYKTSILKNLTNSDFGLYVVQLQNSLGQKLVP
FRVTQQGKPDSPNNLFLDCSEPNKATLYWTPGFNGLAKTESGYQTFQILYKSEPDADFITDTNAIKDNGGRVSGIVGNLA
SKNWTFSLLAKNAFGITAADSSAFCSVNAAKSDEGRLLFHGGSFGAGIGLTVGVIAIPLTVMVVIWRKRADIDDSGRMYE
DIGKIEIQESNYSQLGTTDDTLEYVNTSLSTERGES

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