Gene
Gene Model ID | pfu_aug2.0_111.1_03654 |
---|---|
Locus | scaffold111.1 : 499595 ... 510574 : - |
To GenomeBrowser | scaffold111.1:499595..510574 |
Genes list of scaffold | scaffold111.1 |
Synonym | pfu_aug1.0_15569.1_18230 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_111.1_03654.t1 | 8 | 1 | Ig_3 | 2 | 26 | 9.2e-24 | 83.7 | 7.4 | 12000.0 | -3.2 |
pfu_aug2.0_111.1_03654.t1 | 6 | 1 | I-set | 4 | 33 | 1.4e-26 | 92.1 | 0.0019 | 3.2 | 7.6 |
pfu_aug2.0_111.1_03654.t1 | 7 | 1 | V-set | 10 | 42 | 2.6e-15 | 56.3 | 0.0044 | 7.3 | 6.5 |
pfu_aug2.0_111.1_03654.t1 | 8 | 1 | ig | 11 | 28 | 3.6e-15 | 55.8 | 3.2 | 5300.0 | -2.4 |
pfu_aug2.0_111.1_03654.t1 | 7 | 1 | Ig_2 | 14 | 28 | 2.2e-29 | 101.3 | 2.2 | 3700.0 | -1.9 |
pfu_aug2.0_111.1_03654.t1 | 8 | 2 | Ig_3 | 52 | 106 | 9.2e-24 | 83.7 | 0.011 | 19.0 | 5.8 |
pfu_aug2.0_111.1_03654.t1 | 7 | 2 | Ig_2 | 56 | 99 | 2.2e-29 | 101.3 | 0.0064 | 11.0 | 6.2 |
pfu_aug2.0_111.1_03654.t1 | 7 | 2 | V-set | 57 | 73 | 2.6e-15 | 56.3 | 0.83 | 1400.0 | -0.8 |
pfu_aug2.0_111.1_03654.t1 | 5 | 1 | C2-set_2 | 58 | 79 | 2.8e-14 | 52.7 | 0.63 | 1000.0 | -0.4 |
pfu_aug2.0_111.1_03654.t1 | 8 | 2 | ig | 63 | 110 | 3.6e-15 | 55.8 | 0.00053 | 0.87 | 9.7 |
pfu_aug2.0_111.1_03654.t1 | 7 | 3 | Ig_2 | 100 | 185 | 2.2e-29 | 101.3 | 5.2e-08 | 8.5e-05 | 22.6 |
pfu_aug2.0_111.1_03654.t1 | 8 | 3 | Ig_3 | 100 | 170 | 9.2e-24 | 83.7 | 5.0e-08 | 8.2e-05 | 23.0 |
pfu_aug2.0_111.1_03654.t1 | 7 | 3 | V-set | 102 | 175 | 2.6e-15 | 56.3 | 4.6e-08 | 7.6e-05 | 22.5 |
pfu_aug2.0_111.1_03654.t1 | 6 | 2 | I-set | 104 | 183 | 1.4e-26 | 92.1 | 6.2e-08 | 0.0001 | 22.0 |
pfu_aug2.0_111.1_03654.t1 | 5 | 2 | C2-set_2 | 108 | 141 | 2.8e-14 | 52.7 | 0.13 | 210.0 | 1.8 |
pfu_aug2.0_111.1_03654.t1 | 8 | 3 | ig | 113 | 168 | 3.6e-15 | 55.8 | 6.6e-06 | 0.011 | 15.8 |
pfu_aug2.0_111.1_03654.t1 | 6 | 3 | I-set | 193 | 284 | 1.4e-26 | 92.1 | 5.1e-06 | 0.0084 | 15.9 |
pfu_aug2.0_111.1_03654.t1 | 5 | 3 | C2-set_2 | 193 | 270 | 2.8e-14 | 52.7 | 1.7e-11 | 2.8e-08 | 33.5 |
pfu_aug2.0_111.1_03654.t1 | 8 | 4 | Ig_3 | 197 | 270 | 9.2e-24 | 83.7 | 2.8e-05 | 0.046 | 14.2 |
pfu_aug2.0_111.1_03654.t1 | 7 | 4 | Ig_2 | 198 | 279 | 2.2e-29 | 101.3 | 1.5e-07 | 0.00024 | 21.1 |
pfu_aug2.0_111.1_03654.t1 | 7 | 4 | V-set | 198 | 226 | 2.6e-15 | 56.3 | 0.029 | 49.0 | 3.8 |
pfu_aug2.0_111.1_03654.t1 | 8 | 4 | ig | 204 | 227 | 3.6e-15 | 55.8 | 0.0005 | 0.83 | 9.8 |
pfu_aug2.0_111.1_03654.t1 | 8 | 5 | ig | 263 | 271 | 3.6e-15 | 55.8 | 7.5 | 12000.0 | -3.6 |
pfu_aug2.0_111.1_03654.t1 | 8 | 5 | Ig_3 | 287 | 356 | 9.2e-24 | 83.7 | 4.9e-10 | 8.1e-07 | 29.4 |
pfu_aug2.0_111.1_03654.t1 | 7 | 5 | Ig_2 | 291 | 369 | 2.2e-29 | 101.3 | 1.6e-12 | 2.6e-09 | 37.0 |
pfu_aug2.0_111.1_03654.t1 | 5 | 4 | C2-set_2 | 291 | 329 | 2.8e-14 | 52.7 | 0.001 | 1.7 | 8.5 |
pfu_aug2.0_111.1_03654.t1 | 8 | 6 | ig | 305 | 354 | 3.6e-15 | 55.8 | 0.0016 | 2.7 | 8.1 |
pfu_aug2.0_111.1_03654.t1 | 6 | 4 | I-set | 322 | 368 | 1.4e-26 | 92.1 | 0.00011 | 0.19 | 11.6 |
pfu_aug2.0_111.1_03654.t1 | 7 | 5 | V-set | 340 | 356 | 2.6e-15 | 56.3 | 0.14 | 230.0 | 1.7 |
pfu_aug2.0_111.1_03654.t1 | 8 | 6 | Ig_3 | 374 | 441 | 9.2e-24 | 83.7 | 9.4e-10 | 1.5e-06 | 28.5 |
pfu_aug2.0_111.1_03654.t1 | 5 | 5 | C2-set_2 | 375 | 434 | 2.8e-14 | 52.7 | 0.00054 | 0.89 | 9.4 |
pfu_aug2.0_111.1_03654.t1 | 7 | 6 | Ig_2 | 379 | 448 | 2.2e-29 | 101.3 | 7.5e-08 | 0.00012 | 22.0 |
pfu_aug2.0_111.1_03654.t1 | 6 | 5 | I-set | 380 | 443 | 1.4e-26 | 92.1 | 0.00028 | 0.47 | 10.3 |
pfu_aug2.0_111.1_03654.t1 | 7 | 6 | V-set | 385 | 442 | 2.6e-15 | 56.3 | 9.5e-07 | 0.0016 | 18.3 |
pfu_aug2.0_111.1_03654.t1 | 8 | 7 | ig | 387 | 439 | 3.6e-15 | 55.8 | 2.9e-07 | 0.00047 | 20.2 |
pfu_aug2.0_111.1_03654.t1 | 6 | 6 | I-set | 477 | 557 | 1.4e-26 | 92.1 | 1.8e-07 | 0.00029 | 20.6 |
pfu_aug2.0_111.1_03654.t1 | 8 | 7 | Ig_3 | 486 | 552 | 9.2e-24 | 83.7 | 0.031 | 52.0 | 4.4 |
pfu_aug2.0_111.1_03654.t1 | 7 | 7 | Ig_2 | 491 | 563 | 2.2e-29 | 101.3 | 0.16 | 270.0 | 1.7 |
pfu_aug2.0_111.1_03654.t1 | 8 | 8 | ig | 508 | 544 | 3.6e-15 | 55.8 | 1.6 | 2600.0 | -1.4 |
pfu_aug2.0_111.1_03654.t1 | 7 | 7 | V-set | 535 | 556 | 2.6e-15 | 56.3 | 0.12 | 200.0 | 1.8 |
pfu_aug2.0_111.1_03654.t1 | 8 | 8 | Ig_3 | 579 | 594 | 9.2e-24 | 83.7 | 4.1 | 6700.0 | -2.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_111.1_03654.t1 | gi|498989784|ref|XP_004531694.1| | 4.0e-30 | |
pfu_aug2.0_111.1_03654.t1 | gi|751780768|ref|XP_011199520.1| | PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 [Bactrocera dorsalis] | 9.0e-30 |
pfu_aug2.0_111.1_03654.t1 | gi|157104617|ref|XP_001648489.1| | AAEL004133-PA [Aedes aegypti] | 2.0e-29 |
pfu_aug2.0_111.1_03654.t1 | gi|755895075|ref|XP_011295452.1| | PREDICTED: uncharacterized protein LOC101896034, partial [Musca domestica] | 2.0e-29 |
pfu_aug2.0_111.1_03654.t1 | gi|751473772|ref|XP_011192255.1| | PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 [Bactrocera cucurbitae] | 3.0e-29 |
Transcript
Transcript ID | pfu_aug2.0_111.1_03654.t1 |
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Definition | - |
>pfu_aug2.0_111.1_03654.t1 atgaattgtacagtagaaagagctaccaatacagttaaattctgtcttaaagatatcacgaaagctgatgctggtgccta tacaattgcaacagtcagttcaaattctcaaagtagaattggacaagtgtatgtaatggataagccatcattgcctacga tatcgcagacgtcagccgtagagctacaacatgttactttaacatgcttctcaacatccacatcagcaccatcacctact ggactggctatgttatacacatggacagtggatggaggttctcctgtagaccagaggccagttgtatctacaagcggcaa tgtgacggcaaaggagggttctacagtcaatattacctgcatagtccttgaagcaaatccctctatgataatacgctaca gttggtacaatagtactgatccttctgttattttaacgataaatcgaacacttactttgacgccattgcggagatatgat tatggattgtacaactgtaaggctgcgaacagtgtcggaccgtccatgtcacctgcatctgtggccgtcactgtacaatt tggtcctgattccaatacaatcagtggaaacaaaacagtgaacgaaaactccatgttaaagctaacttgtactgcaagta cttcatatccccaatctatactgacgtggttgaaggatggtatccccttcagtgttaatagtcccgtaaaaacccatgat ggattgtacagagggataataacaagtcaagatttcaccttaatggtaaagaaacaggataagggagcaaacatcacatg tgtggcctcaacaatacatagagtggagacgagtaccgtatttctcaatgtcagatataagccaacagtccaaatcactc ctcccaggatgacagtaattgtcgatgagatggacgtagttgtgacctgtagtgttactgatgctaatccgtatccactt tcgttcgtctggatgaggagcactactgtcatcagtgttcatcagaactattccatccctgttgtcaacagagagaacgc tggtttgtacagctgcatggcaactaacgtagccggaacatcagactcagcgaatatgtctgttgatgtcctttaccctc caaaaatagccaacatgtcaaagcaaacaccggaggaagggtcaagtataacgttaccttgtatcgtaacttcatcaaac cctccacctcaacgcatctactggactcggagaaaagatccttcgttcatagtgaatggaagtatcttatcaattacaag tatgaagagaaccgatacggatgtgtacatctgtaatgcagaaagtataatggtatcatcaacaggcaagactgttactt cagtatccaaaatggatgttataatcgacgtattatgtcctccacaaccattaaatagtacgttagcgatggaacgagtt gttgttggacaagataattccttgaacattacatttcagttcactggaagtcctcttccaaccgtttctttgatttttga ctttaacaataactcctcgattgaaaataatcctttgattcaagtggaggaattcgacataggaaaatacaaaacgtcaa ttctgaagaacttgacgaacagtgattttggattgtatgttgttcagttacagaattccctgggacaaaagttggttcct ttccgtgtaacgcagcaaggaaaaccggattccccaaataatttattcctcgactgctctgaaccaaacaaagcaacact gtactggactcctggattcaacggccttgctaaaactgagagtggataccaaacatttcagatactgtataagagtgaac cagacgctgacttcataacagatacaaatgcaataaaggacaacggtggcagagtaagtggaattgttggaaaccttgca tctaagaattggacattttcgttattggcaaagaatgcttttggcattacagctgcagattcttccgctttttgctctgt aaatgctgcaaaaagtgatgaaggtagattattattccatggtggaagctttggtgctggtataggtctaacggtcggtg tcatcgcaatcccccttacagtaatggttgttatatggcgtaaaagagctgacatagatgatagtggaagaatgtacgaa gacataggcaagattgagattcaggaatcaaactatagccaacttggtactaccgatgatacactagagtatgtaaatac atcgttgagtacagaacgaggggagagttag |
Protein
Protein ID | pfu_aug2.0_111.1_03654.t1 |
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Definition | - |
>pfu_aug2.0_111.1_03654.t1 MNCTVERATNTVKFCLKDITKADAGAYTIATVSSNSQSRIGQVYVMDKPSLPTISQTSAVELQHVTLTCFSTSTSAPSPT GLAMLYTWTVDGGSPVDQRPVVSTSGNVTAKEGSTVNITCIVLEANPSMIIRYSWYNSTDPSVILTINRTLTLTPLRRYD YGLYNCKAANSVGPSMSPASVAVTVQFGPDSNTISGNKTVNENSMLKLTCTASTSYPQSILTWLKDGIPFSVNSPVKTHD GLYRGIITSQDFTLMVKKQDKGANITCVASTIHRVETSTVFLNVRYKPTVQITPPRMTVIVDEMDVVVTCSVTDANPYPL SFVWMRSTTVISVHQNYSIPVVNRENAGLYSCMATNVAGTSDSANMSVDVLYPPKIANMSKQTPEEGSSITLPCIVTSSN PPPQRIYWTRRKDPSFIVNGSILSITSMKRTDTDVYICNAESIMVSSTGKTVTSVSKMDVIIDVLCPPQPLNSTLAMERV VVGQDNSLNITFQFTGSPLPTVSLIFDFNNNSSIENNPLIQVEEFDIGKYKTSILKNLTNSDFGLYVVQLQNSLGQKLVP FRVTQQGKPDSPNNLFLDCSEPNKATLYWTPGFNGLAKTESGYQTFQILYKSEPDADFITDTNAIKDNGGRVSGIVGNLA SKNWTFSLLAKNAFGITAADSSAFCSVNAAKSDEGRLLFHGGSFGAGIGLTVGVIAIPLTVMVVIWRKRADIDDSGRMYE DIGKIEIQESNYSQLGTTDDTLEYVNTSLSTERGES |