Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1112.1_08171
Locus scaffold1112.1 : 158497 ... 167475 : -
To GenomeBrowser scaffold1112.1:158497..167475
Genes list of scaffold scaffold1112.1
Synonym pfu_aug1.0_4511.1_23596

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1112.1_08171.t1 gi|751229312|ref|XP_011168110.1| PREDICTED: putative nuclease HARBI1 [Solenopsis invicta] 2.0e-09
pfu_aug2.0_1112.1_08171.t1 gi|499044323|ref|XP_004572759.1| 4.0e-09
pfu_aug2.0_1112.1_08171.t1 gi|734650424|ref|XP_010754542.1| PREDICTED: putative nuclease HARBI1, partial [Larimichthys crocea] 4.0e-09
pfu_aug2.0_1112.1_08171.t1 gi|751231861|ref|XP_011169518.1| PREDICTED: putative nuclease HARBI1 [Solenopsis invicta] 8.0e-09
pfu_aug2.0_1112.1_08171.t1 gi|749746827|ref|XP_011135511.1| PREDICTED: uncharacterized protein LOC105180886, partial [Harpegnathos saltator] 9.0e-09

Transcript
Transcript IDpfu_aug2.0_1112.1_08171.t1
Definition-
>pfu_aug2.0_1112.1_08171.t1
atgctggagcccctgcgggaagaggaaagtgaggtccaggtgatctcacttcctgacatagagctaccaaagacggcaga
ggaagaggacatgctggcaggaattcttcgagacgaatgcagccaagcagctacggaattccctgaggaggaggcccagg
tggcggcaggagctggtatcctgtcacagatcttccactgcatgcaggacatacagaaggaagctattcaaaccaacagg
ctgctgaccgtgttgaacactggccaagatcagtggttaccataccaaagaggagaaacgaaacccgaagatcagacaga
agtgggagacgctaaaaatgtaaattatgttttattgtaccaaggatttccaaatgtcctaggatacattgacggaacgc
acatcaaaattaagaggccaaaagacaacgagttagactacgtgaaccataaaggttggcattctatcaatgttcaggta
aataactttaatgagttaaagaagatcctgacgataatctcaacagcactcacaatagagcacaaaattaaacatcgacg
gacccctagcaagctagaggtgggaccaggtgcccgggaggantttcctgtaggtcgattcagtagcatatccaaactca
cacataagagaagggagggatatccaaccagacccggttgcagtagcaacggcaaaacaccaggtgcgaaaacagaagac
gaactcatcaaaagatga

Protein
Protein IDpfu_aug2.0_1112.1_08171.t1
Definition-
>pfu_aug2.0_1112.1_08171.t1
MLEPLREEESEVQVISLPDIELPKTAEEEDMLAGILRDECSQAATEFPEEEAQVAAGAGILSQIFHCMQDIQKEAIQTNR
LLTVLNTGQDQWLPYQRGETKPEDQTEVGDAKNVNYVLLYQGFPNVLGYIDGTHIKIKRPKDNELDYVNHKGWHSINVQV
NNFNELKKILTIISTALTIEHKIKHRRTPSKLEVGPGAREXFPVGRFSSISKLTHKRREGYPTRPGCSSNGKTPGAKTED
ELIKR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495