Gene
| Gene Model ID | pfu_aug2.0_1114.1_14799 |
|---|---|
| Locus | scaffold1114.1 : 172221 ... 186895 : - |
| To GenomeBrowser | scaffold1114.1:172221..186895 |
| Genes list of scaffold | scaffold1114.1 |
| Synonym | pfu_aug1.0_8267.1_60392 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1114.1_14799.t1 | 1 | 1 | TGT | 49 | 320 | 0.0 | 186.2 | 0.0 | 0.0 | 184.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1114.1_14799.t1 | gi|524915212|ref|XP_005112411.1| | PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1114.1_14799.t1 | gi|524915208|ref|XP_005112409.1| | PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1114.1_14799.t1 | gi|723126398|ref|XP_010295564.1| | PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1, partial [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_1114.1_14799.t1 | gi|701382238|ref|XP_009964964.1| | PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1, partial [Tyto alba] | 0.0 |
| pfu_aug2.0_1114.1_14799.t1 | gi|677450404|gb|KFQ42130.1| | Queuine tRNA-ribosyltransferase subunit QTRTD1, partial [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1114.1_14799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1114.1_14799.t1 atgttgagggaatacaaggatttggagcatgcatcgttactttctgtgcacgacccagctcaggatgtaccgagtggtta taatgacaaagccagtgtggcagtatggggaagggcaggtaaagtcaaagttgacattgacctatttatgaagatacaag aagctgcatgccctacaatttatacagcactctctgactctgacacagatgcccagtcaggaaaaaaacgatgtaccaaa gccgtagacagaactcttggctttttagatgatattgtcgatagacacagaaaatcaaagagattaaaggactctgcgtt gattggtgcagtagtgggtggatactcagaacatgagaggttacggagtgcaaaagaaacctctaccagacctgtacaag acccaagatttgaccttgacctttatgttgctgttttagtttggaaggattctatccccatgggaccaaattctgaaaac tttgattacaaatccttgtctgctctcctgacaaaagttctggagtgcttacaagaggacaaatgtcgtttacttccagg tgtattacgaccagaccaagtattacacgccgttaccatgggtatagacatatttgatagttcatatccttacattgtca ctgagcgagggaatgctcttacactagatctggacttcttagaagataaagaaagtgatcaagaaaacatttcgaatgaa gggatagaaatggttatgaaagataaaaggtatgttgacgatttcactcctctcttcgccaagtgccaatgttacacatg tagaaactacacaagggcctacatcaatcatttgatggtcacaaaggaactactgggcctctcattactaatgatacata acctccacacttacttcagattttttgatgcagtgagattatctctacaaatgaacaaattcagtgaattaaaatcacat atagaaaagcaaattgtaataaatggagattcctga |
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Protein
| Protein ID | pfu_aug2.0_1114.1_14799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1114.1_14799.t1 MLREYKDLEHASLLSVHDPAQDVPSGYNDKASVAVWGRAGKVKVDIDLFMKIQEAACPTIYTALSDSDTDAQSGKKRCTK AVDRTLGFLDDIVDRHRKSKRLKDSALIGAVVGGYSEHERLRSAKETSTRPVQDPRFDLDLYVAVLVWKDSIPMGPNSEN FDYKSLSALLTKVLECLQEDKCRLLPGVLRPDQVLHAVTMGIDIFDSSYPYIVTERGNALTLDLDFLEDKESDQENISNE GIEMVMKDKRYVDDFTPLFAKCQCYTCRNYTRAYINHLMVTKELLGLSLLMIHNLHTYFRFFDAVRLSLQMNKFSELKSH IEKQIVINGDS |
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