Gene
| Gene Model ID | pfu_aug2.0_1115.1_18100 |
|---|---|
| Locus | scaffold1115.1 : 89436 ... 97351 : + |
| To GenomeBrowser | scaffold1115.1:89436..97351 |
| Genes list of scaffold | scaffold1115.1 |
| Synonym | pfu_aug1.0_3623.1_30474 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1115.1_18100.t1 | 1 | 1 | Fibrinogen_C | 32 | 175 | 1.6e-29 | 103.1 | 3.7e-32 | 5.5e-28 | 98.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1115.1_18100.t1 | gi|260782263|ref|XP_002586209.1| | hypothetical protein BRAFLDRAFT_148190 [Branchiostoma floridae] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1115.1_18100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1115.1_18100.t1 atggaggaatactgtgacttggatacagaaggcgtgggttgggcgggagaggagatggaggcactctatggcattgatac agaatgtttggaaaagacggttgttatgaaaagatttgatggatctgtcaacttcaatcagagttggaataaatacaagt atggatttggcagcgccaggggcgaatattggctgggcaatgagtacttccatatattgacctggagaagtaattacgga gcatacttcaagttacagtcctggggaagtaagtggtactgggcctggtacacctggttatacctttattccgagaataa cggatacaaaataagatttggtggatataaaggaaatgctggacaaacgctcgatcttagccttaaatcaggtggtacca tacaacaccagcgcttttcaacacatgacagagatcaggatcaaagtgtagtgaatgtagccagacaatatggaggtgga tggtggtactaccactgggcatactgtgcactgacggggagatacggatcagcaccgcctcatggtgacttctgcattcc tgccattctatcccatgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_1115.1_18100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1115.1_18100.t1 MEEYCDLDTEGVGWAGEEMEALYGIDTECLEKTVVMKRFDGSVNFNQSWNKYKYGFGSARGEYWLGNEYFHILTWRSNYG AYFKLQSWGSKWYWAWYTWLYLYSENNGYKIRFGGYKGNAGQTLDLSLKSGGTIQHQRFSTHDRDQDQSVVNVARQYGGG WWYYHWAYCALTGRYGSAPPHGDFCIPAILSHV |
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