Gene
| Gene Model ID | pfu_aug2.0_1115.1_18104 |
|---|---|
| Locus | scaffold1115.1 : 185588 ... 191345 : - |
| To GenomeBrowser | scaffold1115.1:185588..191345 |
| Genes list of scaffold | scaffold1115.1 |
| Synonym | pfu_aug1.0_844.1_65667 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| origin recognition complex subunit 5-like | GO:0000808 GO:0005634 GO:0006260 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1115.1_18104.t1 | 1 | 1 | ORC5_C | 2 | 86 | 2.1e-28 | 99.5 | 1.5e-32 | 2.3e-28 | 99.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1115.1_18104.t1 | gi|676468174|ref|XP_009058124.1| | hypothetical protein LOTGIDRAFT_209785 [Lottia gigantea] | 4.99983e-42 |
| pfu_aug2.0_1115.1_18104.t1 | gi|432943272|ref|XP_004083135.1| | PREDICTED: origin recognition complex subunit 5 [Oryzias latipes] | 1.0e-38 |
| pfu_aug2.0_1115.1_18104.t1 | gi|705687005|ref|XP_010120832.1| | PREDICTED: origin recognition complex subunit 5-like, partial [Chlamydotis macqueenii] | 3.0e-38 |
| pfu_aug2.0_1115.1_18104.t1 | gi|597741263|ref|XP_007232770.1| | PREDICTED: origin recognition complex subunit 5 [Astyanax mexicanus] | 1.0e-37 |
| pfu_aug2.0_1115.1_18104.t1 | gi|291240781|ref|XP_002740279.1| | PREDICTED: origin recognition complex subunit 5-like [Saccoglossus kowalevskii] | 2.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_1115.1_18104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1115.1_18104.t1 accagtaatcacatgttgggacctaagccattccccatggacagacttctggccatattttactctatatgtgagggtaa agtagccccaacagcaaatatctttatgcagatttcatcattgacgagccttcacctactctcacaagtagctggagaag atcagattgatgtaccaaaatacaaatgtcttgtgtctctggaatttatcaaatctgtctcaaggacggttggatttgat gtcatgcggtacctgtatgattttgtatga |
|
Protein
| Protein ID | pfu_aug2.0_1115.1_18104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1115.1_18104.t1 TSNHMLGPKPFPMDRLLAIFYSICEGKVAPTANIFMQISSLTSLHLLSQVAGEDQIDVPKYKCLVSLEFIKSVSRTVGFD VMRYLYDFV |
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