Gene
| Gene Model ID | pfu_aug2.0_1120.1_01398 |
|---|---|
| Locus | scaffold1120.1 : 112166 ... 141732 : + |
| To GenomeBrowser | scaffold1120.1:112166..141732 |
| Genes list of scaffold | scaffold1120.1 |
| Synonym | pfu_aug1.0_532.1_65501 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1120.1_01398.t1 | 1 | 1 | ELM2 | 91 | 141 | 1.2e-11 | 45.0 | 1.3e-14 | 4.7e-11 | 43.1 |
| pfu_aug2.0_1120.1_01398.t1 | 2 | 1 | Myb_DNA-binding | 176 | 219 | 4.9e-16 | 58.5 | 5.5e-08 | 0.0002 | 21.3 |
| pfu_aug2.0_1120.1_01398.t1 | 2 | 2 | Myb_DNA-binding | 397 | 440 | 4.9e-16 | 58.5 | 5.6e-12 | 2.1e-08 | 34.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1120.1_01398.t1 | gi|524867765|ref|XP_005090690.1| | PREDICTED: REST corepressor 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1120.1_01398.t1 | gi|749784893|ref|XP_011146239.1| | PREDICTED: REST corepressor 3 isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_1120.1_01398.t1 | gi|571553873|ref|XP_006565613.1| | PREDICTED: REST corepressor 3 isoform X3 [Apis mellifera] | 0.0 |
| pfu_aug2.0_1120.1_01398.t1 | gi|350400941|ref|XP_003486009.1| | 0.0 | |
| pfu_aug2.0_1120.1_01398.t1 | gi|665817837|ref|XP_008557708.1| | PREDICTED: REST corepressor 3 isoform X2 [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1120.1_01398.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01398.t1 atggctaaaaatagcaacttcaaaactgatttacgcatgtacagtaggacttcatttgctaaggaagccagtggatacca tcgaaggcaggtaaaaggacgatcggagagtcaagttggacaaaaagcgacaaattttcgcgaaaatatggttatggcag ataaaagcatcaacgataccaatattcgtaatgggaggaggtcgagatgtgcgacaccaaacgattattcagaggatagc agcgatgattctgatcacgagggaggtggaatgcgtgttggaggagattttcaagccaaagttcctgaatttaaacctga aacaaaacatgaaccaaggaatgatgctatcctagtatgggccccagcagctgaactctctgatgccaaagttgatgagt atgtgaatattgccaaggaaaaacatggttacaacacagaacaagctttaggcatgttgttttggcataagcacaatata gagcgagccttagccgacctccctaatttcacaccattcccggacgagtggacagtcgaggataaagtattatttgagca agcttttagttttcatggcaaaagttttcatcgaattcgtcagatgttgcctgacaagtctatagcaagtctagtcaaat attattactcctggaagaaaaccaggtcacgtacaagcctgatggataagcaagcaaagaaattatataaaactggtgat agtgatgaagagttagaaaacaatggtaaagtagagcaagaggagactactaaagagaatgggaaagaggagaaggatag ctgttctaactgtggcataaccaccacacagctccagtctacgcctaagggatctctctgtacctcatgttaccagtatt ggagacgaactggtgtaatgagaacggcaggtcctaagcggcatgatcatggacaacatcgacataaccccatgaagcac aagaggaaacctccacgaggaatgtacataaacaacgaagatctcaaaggacttgtgatgggacctccgggccaagggga agctttacttaaatctctcgaccaagaacttgtctcacttaaacgccaggtgcagaataataagcagatggtcagtcttc aaaaacataaaacagttaaaggaatagatgacgtcaaacctcccgagatgacaccaagaataaatgccaaatggaccaat gaagagttactactagctgtccaaggggtcagaaagtatggtaaggacttccaggccatagctgatgtgatcggcaataa aacagacttccacatccgtagtttctttgtgaatttccgtagacgatataacctggatgaggtactggccgagtacgaag cagaacatgggatagagtccagtaagacagacaacatactcaaggatgaagataagatggagattgatactaaagaggaa gattcaggatctaaagacacaccccctgcctctgaggctccacccattaataattcaagccctgcctctttagctccacc ccctctccttaaacagcctcagagtacagggcttaaggtgccacaggtctcacagcatccaagattactgccacagcaga gaactattttgcagcagcctccaccattgattcgcccaaacagctcgtctcctgctaacagtaaaccagtgtcctcataa |
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Protein
| Protein ID | pfu_aug2.0_1120.1_01398.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01398.t1 MAKNSNFKTDLRMYSRTSFAKEASGYHRRQVKGRSESQVGQKATNFRENMVMADKSINDTNIRNGRRSRCATPNDYSEDS SDDSDHEGGGMRVGGDFQAKVPEFKPETKHEPRNDAILVWAPAAELSDAKVDEYVNIAKEKHGYNTEQALGMLFWHKHNI ERALADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQAKKLYKTGD SDEELENNGKVEQEETTKENGKEEKDSCSNCGITTTQLQSTPKGSLCTSCYQYWRRTGVMRTAGPKRHDHGQHRHNPMKH KRKPPRGMYINNEDLKGLVMGPPGQGEALLKSLDQELVSLKRQVQNNKQMVSLQKHKTVKGIDDVKPPEMTPRINAKWTN EELLLAVQGVRKYGKDFQAIADVIGNKTDFHIRSFFVNFRRRYNLDEVLAEYEAEHGIESSKTDNILKDEDKMEIDTKEE DSGSKDTPPASEAPPINNSSPASLAPPPLLKQPQSTGLKVPQVSQHPRLLPQQRTILQQPPPLIRPNSSSPANSKPVSS |
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