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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1125.1_18108
Locus scaffold1125.1 : 63266 ... 65427 : +
To GenomeBrowser scaffold1125.1:63266..65427
Genes list of scaffold scaffold1125.1
Synonym pfu_aug1.0_22521.1_40371

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1125.1_18108.t1 gi|524888414|ref|XP_005100778.1| PREDICTED: uncharacterized protein LOC101855110 [Aplysia californica] 3.0e-36
pfu_aug2.0_1125.1_18108.t1 gi|556996474|ref|XP_006001832.1| PREDICTED: sorting nexin-29-like [Latimeria chalumnae] 6.0e-35
pfu_aug2.0_1125.1_18108.t1 gi|390351605|ref|XP_003727690.1| 1.0e-33
pfu_aug2.0_1125.1_18108.t1 gi|524870501|ref|XP_005092035.1| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Aplysia californica] 1.0e-32

Transcript
Transcript IDpfu_aug2.0_1125.1_18108.t1
Definition-
>pfu_aug2.0_1125.1_18108.t1
atgatgaagcagtgcaggaaaactcaaggaactggaaggcagacgccccttcttaacccaaggaaacccaatcgaattgg
tacatgggacaataggactatgtatgagactgggcgtgccattcaggttataaagggaatgcgaaacagtgaatgcaatg
caccaacgaatgatgctgaggaagagaaaaaagatgatttctacctacaactacaggctgtgctagacaagagaagacag
aaagatataactgttttcaagggagatttcaatgcaaaggttggagcagacagatgtcatggggaaacatggactggggc
agatgggagagcgattctcagaactgtgctcactcaacgaaatgatgataggaggaatcctgctgacaaggaagttaaga
ggagcatcaagaaagataaaaaagactatattgacagcctttctaaagaagcagaggaggctgctgggaaatggaatctg
aaagacctgtacatgcttactaagaagttatcagggaaattcaaacaaaatgataagctagtgagggacaaaaatggaaa
cccactaacaaaaactgagaaacagctgatgaggtggacagagcacttcgagaaactattgaatagggcagctcataccg
taccacaaaatttaccacgtgcaggaaccgaactacccataaactgtgaggaatcatcaaggatggaaatacgaaaagct
attaagaagcttcaaaatgggagagcagcaggaccagatgaagtaccagctgaagcaatcagaatagacattaacacagc
agtcgacatcatacacaatctctgtagtaagatctggaaagaggagcaagtaccagctgagtggaaagaaggcatcaaac
tgcataagaaaggagatctcagggattgtaacaactaccgaggaataatgctactgtctgtgccaggcagagttctacac
aggatcctcctggagaggatgaaagatacagtgggcatattgctcaaggaccaacaggccggctttagaaacagaccctg
cgcagacaaaatagcaactctacgcataacagtagaacagtcagctgagtgtaactcccccacgtacgtcaactttgtga
gaaagcctttgatagcatggacagtgagacgctttgaaagctcctggtacactatggagtaccccaaaatcattcgcctg
attcagtgtacatattctggaatgaactgcaaggtagctcacgtaggccaattatattag

Protein
Protein IDpfu_aug2.0_1125.1_18108.t1
Definition-
>pfu_aug2.0_1125.1_18108.t1
MMKQCRKTQGTGRQTPLLNPRKPNRIGTWDNRTMYETGRAIQVIKGMRNSECNAPTNDAEEEKKDDFYLQLQAVLDKRRQ
KDITVFKGDFNAKVGADRCHGETWTGADGRAILRTVLTQRNDDRRNPADKEVKRSIKKDKKDYIDSLSKEAEEAAGKWNL
KDLYMLTKKLSGKFKQNDKLVRDKNGNPLTKTEKQLMRWTEHFEKLLNRAAHTVPQNLPRAGTELPINCEESSRMEIRKA
IKKLQNGRAAGPDEVPAEAIRIDINTAVDIIHNLCSKIWKEEQVPAEWKEGIKLHKKGDLRDCNNYRGIMLLSVPGRVLH
RILLERMKDTVGILLKDQQAGFRNRPCADKIATLRITVEQSAECNSPTYVNFVRKPLIAWTVRRFESSWYTMEYPKIIRL
IQCTYSGMNCKVAHVGQLY

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