Gene
| Gene Model ID | pfu_aug2.0_1125.1_18109 |
|---|---|
| Locus | scaffold1125.1 : 72417 ... 92555 : - |
| To GenomeBrowser | scaffold1125.1:72417..92555 |
| Genes list of scaffold | scaffold1125.1 |
| Synonym | pfu_aug1.0_3037.1_16011 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1125.1_18109.t1 | 1 | 1 | TraB | 60 | 286 | 0.0 | 168.3 | 0.0 | 0.0 | 167.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1125.1_18109.t1 | gi|676442359|ref|XP_009049781.1| | hypothetical protein LOTGIDRAFT_113686, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1125.1_18109.t1 | gi|156386244|ref|XP_001633823.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1125.1_18109.t1 | gi|241720809|ref|XP_002413627.1| | TraB domain-containing protein, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_1125.1_18109.t1 | gi|260804791|ref|XP_002597271.1| | hypothetical protein BRAFLDRAFT_203438 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1125.1_18109.t1 | gi|72027001|ref|XP_787913.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1125.1_18109.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1125.1_18109.t1 atgtgtacacaaccggatgtacacatcatggatgaggcaactggaaaacaagagaaaattgtcactgataacaaggagga aacagttcaggaaaacaagcaaggtcagactgagaacaaacaaagggatgtaactagtgctgaagattttggatctgatt tggaagtgttagagacacagtatggcagtaaggtgtacttggtgggaactgcacattttagcatggaaagccaagaggat gtcgcaagagtaatacaggcgacccagccggacgtagtgactgtggagctatgtaacagtaggaagaacatactcagcta taacgaggagatgttattagaggaagctaagaatataaacacagagaaaattgtcaactctatcaaacagggtataatgc atattttgttactgagtatgtcagcacatctaactaaagaactagggatggctccaggaggggagttcaggagggcatac agagaggccaggaaggttcctagatgtaggttacatctaggtgatcgaccaatacagattactctgaaacgagcattatc atctttgtcactatggcaaaggattcggttggcttggtatttaataacatccaaagatcctataagcaaagaagacgtag agaaatgtaaacagaaggatttactagagcagatgctggaggagatgacaggagagttccctgctcttagccgagtcttt gtcaatgagagagatatttatcttgccagttccttaaaggctgcagctgagcctatacagcacccagaatctcctggagg tataattcccacagtagtggtgggtgtggtggggataggtcacatgcctggaataatggccaactgggatgaagatcatt atgatatagcagaaattatgaaggtaccagaaggctctgtgattggtaaagtattcaagtggacattacgagtgacgtta attggagtagtaactctaggttgtgtgcgattctacaagtgggcagcacccatgattttctga |
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Protein
| Protein ID | pfu_aug2.0_1125.1_18109.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1125.1_18109.t1 MCTQPDVHIMDEATGKQEKIVTDNKEETVQENKQGQTENKQRDVTSAEDFGSDLEVLETQYGSKVYLVGTAHFSMESQED VARVIQATQPDVVTVELCNSRKNILSYNEEMLLEEAKNINTEKIVNSIKQGIMHILLLSMSAHLTKELGMAPGGEFRRAY REARKVPRCRLHLGDRPIQITLKRALSSLSLWQRIRLAWYLITSKDPISKEDVEKCKQKDLLEQMLEEMTGEFPALSRVF VNERDIYLASSLKAAAEPIQHPESPGGIIPTVVVGVVGIGHMPGIMANWDEDHYDIAEIMKVPEGSVIGKVFKWTLRVTL IGVVTLGCVRFYKWAAPMIF |
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