Gene
| Gene Model ID | pfu_aug2.0_1125.1_18110 |
|---|---|
| Locus | scaffold1125.1 : 94886 ... 120450 : + |
| To GenomeBrowser | scaffold1125.1:94886..120450 |
| Genes list of scaffold | scaffold1125.1 |
| Synonym | pfu_aug1.0_6385.1_16914 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysine-specific demethylase 7-like | GO:0005634 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1125.1_18110.t1 | 1 | 1 | PHD | 9 | 56 | 7.1e-10 | 38.4 | 3.0e-13 | 1.5e-09 | 37.4 |
| pfu_aug2.0_1125.1_18110.t1 | 2 | 1 | Cupin_8 | 169 | 331 | 1.1e-08 | 34.9 | 1.9e-10 | 9.5e-07 | 28.5 |
| pfu_aug2.0_1125.1_18110.t1 | 1 | 1 | JmjC | 244 | 339 | 6.9e-10 | 39.1 | 3.2e-12 | 1.6e-08 | 34.7 |
| pfu_aug2.0_1125.1_18110.t1 | 2 | 2 | Cupin_8 | 400 | 488 | 1.1e-08 | 34.9 | 0.0011 | 5.3 | 6.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1125.1_18110.t1 | gi|260809719|ref|XP_002599652.1| | hypothetical protein BRAFLDRAFT_119367 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1125.1_18110.t1 | gi|676475629|ref|XP_009060533.1| | hypothetical protein LOTGIDRAFT_125461 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1125.1_18110.t1 | gi|524895322|ref|XP_005104146.1| | PREDICTED: lysine-specific demethylase 7-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1125.1_18110.t1 | gi|390332890|ref|XP_789776.3| | 0.0 | |
| pfu_aug2.0_1125.1_18110.t1 | gi|749752264|ref|XP_011138470.1| | PREDICTED: lysine-specific demethylase 7A-like isoform X4 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1125.1_18110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1125.1_18110.t1 atggcgtccaatgatgagcctgtttattgtttatgtcgaaaaccatatgatgaatctgagtttatgattgaatgtgacgt atgcaaagactggtttcatggcagttgcgtaggtgtacaggagtaccaagcatcagatatagaaatataccactgtccaa actgtcagctgacccatggacccttagttttaaagaaaagaagaaattggcatcggcatgattactcagagcaagatggt tcctctaaggctgtacagacaggaacagtggtatttataaaagagctgaaaaacagacattttccaagcgctgatgaaat tcctatagcacgtttacatggcagtgaagttaacattgagtacctgaagaaaaatggattctatgcacctatgatcgtag ataagaaagatggattaggacttgtagtgccgccttcaacatttaagatacaagatgtagaaaattatgttggttccatg agaataatagatgtgatagatgtggctaagcaggaagactataaaatgttgatgagagaatggacagaatactacagtag tccaaataggatcaaagtctacaatgtcatcagtctcgaattctctgccaccaaactgagtgagttagtacatcctccga gcctggttaaggatctgagttgggtcagtaacatatggcccgaccgtcttcccgatgactgtgcttacaccaaacctgaa gtacagaaatactgcctgatgggggtcagagatagctttactgactttcatatcgactttggtggaacctcagtatggta tcatgtcctttggggggaaaagatattttatcttgtacgtccaactcctgccaatatagccttgtatgaatcctggttgt catcgtccaatcagagtgagactttcttcggtgaccaggtagatgtatgttataagtgtgtggttaaacaaggtcagacg gtatttatacctacaggctggatccatgccgtgttcacacctattgattccctcgtgtttggaggaaacttcctgcatga cttcaatatacctctacagttacaagtttatgaaatagaaaaaagagtgaagacgcccgccaagtacctctttccaagct ttgagacatgtaattggtacgcagctaaacatatcctggacttaatcagagattacagagatgaaggtaaaagaccacct ccctacgtcattaatggtgctaaaagtctagccgtccatttgaaggcttggacacagaggaaagaccctaaagtcagccc agtcaagctgagaacaaagggtgataaagtacgggtagaaaaggtaaagacagaaaaaaagaaaaaaaagaagaatttac cgacgccaaaacagatggtaaatatagatctcctccaccaccatacaacagaaaaactacaagaaatggagacaaaacct aacgtatataccttccaggaaggtgaggaggaggaggaagaagaaaatgaaggatcttccctgaaggtacggataccaaa ggctggtgcttacctggacactacactgaaacaagaaaaggcacctgccgagggctttgttaagatagaacctcccccag aaggtgctgtgaaaagtgaagaatctcaggaaagtgcagtggggctaaggctcaaagtgtcaaacggcaaaattataagt gatgtgagacacaggactagcgttaaaagtggacgacgtgattctcaggtagagaaccaagaaaatgatccagatagtga tactgacaatctagtcgtggatgaacatccacataaaagacaaaaacaaactgtgtctacagcatcaactttgaaacctg ggtcattaaagctcaaactatctttccatggcaagcctcttcctgtagactctgcaaagagtcaagagagttctcaggag tcagaagctgttacaagtcaaagtgagtctgagtcaggagtagatgactcaggtcagaggcgtaccaatgttcctacgat aagaggaggtctaaatttgggtatatcggacatacttgaagctagcgggtatggtacagagacggacttcattgtggata atgaaatgagagcatcttctcctggaatgagagatgctattcagggaatgttatccatgagtcagatgggagagggaaga ctcttctcaaaggacggtagtcggaagtcaagagcacaccaaaggtcacagctcgcgatggaagaggagaaaaagctaga gtcgtgcttcacagatgaagaatttatctatcctaaccttgacctctcagatgatgagatggagccagtgaaggttacca aggcagccagagatgataactggaatcctaaagctcgagtgaacgttactgttcctaaaggagatcgtccacagagagaa ggtgtaaggaaggaggccgtagagcaggtgttggcagctgccgcggctaaaccagcaagctccatgaaaccaaaaaagcc aaagaagaggacaaagtcagacagttctgcattccgtcctaatttagtcaagccagtcaagacaccccaagaccccacat ctagtccaacaaaggtcaaaaggccaaagaaagcaccagcattactaggtgtttatagaatagataacaaatactatggg acttag |
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Protein
| Protein ID | pfu_aug2.0_1125.1_18110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1125.1_18110.t1 MASNDEPVYCLCRKPYDESEFMIECDVCKDWFHGSCVGVQEYQASDIEIYHCPNCQLTHGPLVLKKRRNWHRHDYSEQDG SSKAVQTGTVVFIKELKNRHFPSADEIPIARLHGSEVNIEYLKKNGFYAPMIVDKKDGLGLVVPPSTFKIQDVENYVGSM RIIDVIDVAKQEDYKMLMREWTEYYSSPNRIKVYNVISLEFSATKLSELVHPPSLVKDLSWVSNIWPDRLPDDCAYTKPE VQKYCLMGVRDSFTDFHIDFGGTSVWYHVLWGEKIFYLVRPTPANIALYESWLSSSNQSETFFGDQVDVCYKCVVKQGQT VFIPTGWIHAVFTPIDSLVFGGNFLHDFNIPLQLQVYEIEKRVKTPAKYLFPSFETCNWYAAKHILDLIRDYRDEGKRPP PYVINGAKSLAVHLKAWTQRKDPKVSPVKLRTKGDKVRVEKVKTEKKKKKKNLPTPKQMVNIDLLHHHTTEKLQEMETKP NVYTFQEGEEEEEEENEGSSLKVRIPKAGAYLDTTLKQEKAPAEGFVKIEPPPEGAVKSEESQESAVGLRLKVSNGKIIS DVRHRTSVKSGRRDSQVENQENDPDSDTDNLVVDEHPHKRQKQTVSTASTLKPGSLKLKLSFHGKPLPVDSAKSQESSQE SEAVTSQSESESGVDDSGQRRTNVPTIRGGLNLGISDILEASGYGTETDFIVDNEMRASSPGMRDAIQGMLSMSQMGEGR LFSKDGSRKSRAHQRSQLAMEEEKKLESCFTDEEFIYPNLDLSDDEMEPVKVTKAARDDNWNPKARVNVTVPKGDRPQRE GVRKEAVEQVLAAAAAKPASSMKPKKPKKRTKSDSSAFRPNLVKPVKTPQDPTSSPTKVKRPKKAPALLGVYRIDNKYYG T |
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