Gene
| Gene Model ID | pfu_aug2.0_11256.1_22980 |
|---|---|
| Locus | scaffold11256.1 : 1853 ... 4587 : + |
| To GenomeBrowser | scaffold11256.1:1853..4587 |
| Genes list of scaffold | scaffold11256.1 |
| Synonym | pfu_aug1.0_373.1_00274 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mevalonate kinase | GO:0000166 GO:0005737 GO:0008610 GO:0016301 GO:0016773 GO:0044237 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11256.1_22980.t1 | 2 | 1 | GHMP_kinases_C | 4 | 48 | 5.0e-18 | 65.0 | 4.2e-13 | 3.1e-09 | 36.9 |
| pfu_aug2.0_11256.1_22980.t1 | 2 | 2 | GHMP_kinases_C | 57 | 96 | 5.0e-18 | 65.0 | 5.7e-10 | 4.3e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11256.1_22980.t1 | gi|675422834|ref|XP_008925027.1| | PREDICTED: mevalonate kinase, partial [Manacus vitellinus] | 4.0e-12 |
| pfu_aug2.0_11256.1_22980.t1 | gi|514684215|ref|XP_004989688.1| | hypothetical protein PTSG_09431 [Salpingoeca rosetta] | 7.0e-12 |
| pfu_aug2.0_11256.1_22980.t1 | gi|156369833|ref|XP_001628178.1| | predicted protein [Nematostella vectensis] | 9.0e-12 |
| pfu_aug2.0_11256.1_22980.t1 | gi|749761673|ref|XP_011141276.1| | PREDICTED: mevalonate kinase isoform X2 [Harpegnathos saltator] | 1.0e-11 |
| pfu_aug2.0_11256.1_22980.t1 | gi|589270318|ref|XP_007000889.1| | hypothetical protein TREMEDRAFT_37278 [Tremella mesenterica DSM 1558] | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_11256.1_22980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11256.1_22980.t1 atgatcagaatgaaccagctacagttgaaggttctgggagtcagccaccctaccctggataccatctgtcagagctgtga ggaactgggactgacagccaaactaactggggcaggtggagggggctgtgcttactgtctgatacctccaggtaagataa tgttgctggcatccctctatcagagctgtgaggaactgggactaacagccaaactaactggggcaggtggagggggctgt gcttactgcctgatacctccagattttcctgctagtaaggtagaagagctgaagaagagactagaagataaaggtctcac ttgttacgatacagcagtgggagtgccagggattctttgtcactctgtgacgtgtagaaatgagtccgctacatag |
|
Protein
| Protein ID | pfu_aug2.0_11256.1_22980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11256.1_22980.t1 MIRMNQLQLKVLGVSHPTLDTICQSCEELGLTAKLTGAGGGGCAYCLIPPGKIMLLASLYQSCEELGLTAKLTGAGGGGC AYCLIPPDFPASKVEELKKRLEDKGLTCYDTAVGVPGILCHSVTCRNESAT |
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