Gene
| Gene Model ID | pfu_aug2.0_11281.1_06462 |
|---|---|
| Locus | scaffold11281.1 : 266 ... 4927 : + |
| To GenomeBrowser | scaffold11281.1:266..4927 |
| Genes list of scaffold | scaffold11281.1 |
| Synonym | pfu_aug1.0_4640.1_16456 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11281.1_06462.t1 | 2 | 1 | GDPD | 86 | 110 | 1.2e-24 | 87.2 | 0.27 | 4100.0 | -3.0 |
| pfu_aug2.0_11281.1_06462.t1 | 2 | 2 | GDPD | 122 | 207 | 1.2e-24 | 87.2 | 1.3e-28 | 2.0e-24 | 86.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11281.1_06462.t1 | gi|524910099|ref|XP_005109932.1| | PREDICTED: putative glycerophosphocholine phosphodiesterase GPCPD1 homolog T05H10.7-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_11281.1_06462.t1 | gi|676491057|ref|XP_009065472.1| | hypothetical protein LOTGIDRAFT_132728 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_11281.1_06462.t1 | gi|746832969|ref|XP_011060957.1| | PREDICTED: glycerophosphocholine phosphodiesterase GPCPD1-like isoform X3 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_11281.1_06462.t1 | gi|746832967|ref|XP_011060947.1| | PREDICTED: glycerophosphocholine phosphodiesterase GPCPD1-like isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_11281.1_06462.t1 | gi|746832963|ref|XP_011060933.1| | PREDICTED: glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11281.1_06462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11281.1_06462.t1 atgaatgaagaacagtgcgtacctgtagtgcagtctcagtttggtacaatatacaacaaagatgactatatgatatttac agcccaaacacctgaaccagaaagcttgggttttcagtttgatttctatgtgagagagccagacatggagcccaagcata taggatactgctatctcttgccaatcgatctaacaaaatgcaatgatgtaaagaaagtgcctataacaggcctaaggcat aaacctataggccaagttagattggaatatttaatagccaaaccagtgccaggtctcaatatgaatatggaggtatcata tagaaattactggaagtttgaaagaggatcactagatgtggggcatcgaggaatgggctcatcatataaacataaaaagc tggaggcagtgagagaaaatacagtagaatccctccagaaagcgggtagtcatggtgctgattatgtggagtttgatgtt cagttaagcaaggacttaatacccatcatttatcatgattttgatgtggcacttacataccgcaagaaaaagcatgatga gctggaatacttcaagttaccagtaaaagatctaacgttggcggaacttcaacagatgaag |
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Protein
| Protein ID | pfu_aug2.0_11281.1_06462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11281.1_06462.t1 MNEEQCVPVVQSQFGTIYNKDDYMIFTAQTPEPESLGFQFDFYVREPDMEPKHIGYCYLLPIDLTKCNDVKKVPITGLRH KPIGQVRLEYLIAKPVPGLNMNMEVSYRNYWKFERGSLDVGHRGMGSSYKHKKLEAVRENTVESLQKAGSHGADYVEFDV QLSKDLIPIIYHDFDVALTYRKKKHDELEYFKLPVKDLTLAELQQMK |
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