Gene
| Gene Model ID | pfu_aug2.0_113.1_10280 |
|---|---|
| Locus | scaffold113.1 : 122811 ... 129221 : - |
| To GenomeBrowser | scaffold113.1:122811..129221 |
| Genes list of scaffold | scaffold113.1 |
| Synonym | pfu_aug1.0_1357.1_22557 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_113.1_10280.t1 | 2 | 1 | DUF4558 | 10 | 20 | 4.3e-17 | 61.8 | 0.64 | 3100.0 | -1.9 |
| pfu_aug2.0_113.1_10280.t1 | 2 | 2 | DUF4558 | 33 | 119 | 4.3e-17 | 61.8 | 8.8e-21 | 4.3e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_113.1_10280.t1 | gi|198436647|ref|XP_002128814.1| | PREDICTED: uncharacterized protein C1orf189 homolog [Ciona intestinalis] | 4.0e-25 |
| pfu_aug2.0_113.1_10280.t1 | gi|390333414|ref|XP_003723705.1| | 9.0e-24 | |
| pfu_aug2.0_113.1_10280.t1 | gi|676436361|ref|XP_009047857.1| | hypothetical protein LOTGIDRAFT_230606 [Lottia gigantea] | 4.0e-22 |
| pfu_aug2.0_113.1_10280.t1 | gi|260794557|ref|XP_002592275.1| | hypothetical protein BRAFLDRAFT_119629 [Branchiostoma floridae] | 9.0e-21 |
| pfu_aug2.0_113.1_10280.t1 | gi|156364518|ref|XP_001626394.1| | predicted protein [Nematostella vectensis] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_113.1_10280.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10280.t1 atgagtatgtcaacaacgcttcgatatgaaattaatctgagcaatccgagacttaaagaggcattcagtcgacaacaaga aagaatccagaaagatgaaatgatggctgacagagagaatgtcgtaaggctggagaagaatacgaatctcagggcagagt ggaatgaaaatttagagaaagcatcttggaacaaaaggattgaacatgaaaataaattaataaaagatgaaatgagacaa gcagctaaagcctcattagcagtaagaagaacagcattacaacagctcatagcaaaagagaaggatatgtatgaacaaga gctccatctactgggaaaaacattcttcaagcagagaatatga |
|
Protein
| Protein ID | pfu_aug2.0_113.1_10280.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10280.t1 MSMSTTLRYEINLSNPRLKEAFSRQQERIQKDEMMADRENVVRLEKNTNLRAEWNENLEKASWNKRIEHENKLIKDEMRQ AAKASLAVRRTALQQLIAKEKDMYEQELHLLGKTFFKQRI |
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