Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_113.1_10282
Locus scaffold113.1 : 161433 ... 170761 : -
To GenomeBrowser scaffold113.1:161433..170761
Genes list of scaffold scaffold113.1
Synonym pfu_aug1.0_1357.1_22559

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_113.1_10282.t1 gi|478494792|ref|XP_004421744.1| PREDICTED: zinc finger protein 609 [Ceratotherium simum simum] 0.0
pfu_aug2.0_113.1_10282.t1 gi|752385509|ref|XP_011216769.1| PREDICTED: zinc finger protein 609 isoform X2 [Ailuropoda melanoleuca] 0.0
pfu_aug2.0_113.1_10282.t1 gi|301756889|ref|XP_002914290.1| PREDICTED: zinc finger protein 609 isoform X1 [Ailuropoda melanoleuca] 0.0
pfu_aug2.0_113.1_10282.t1 gi|74000863|ref|XP_535515.2| PREDICTED: zinc finger protein 609 isoform X2 [Canis lupus familiaris] 0.0
pfu_aug2.0_113.1_10282.t1 gi|562824008|ref|XP_006141789.1| PREDICTED: zinc finger protein 609-like isoform X1 [Tupaia chinensis] 0.0

Transcript
Transcript IDpfu_aug2.0_113.1_10282.t1
Definition-
>pfu_aug2.0_113.1_10282.t1
atgagtggtttagagcaccactcaactgtcgataaagggttaaaaatgaaaatcaaaagaacgaagaatgctgcatcctc
aaattcaagcaagactgattcatctaagcatgagatagtgaaaggtggagagaagaatagtgaaaaaggatcaagtagca
cagccgatggatctgcgactaatggttccacatcagagaaagttaaaagtacggcagacaaggagaagtcaccaaaggca
aaagggatgtaccgcaaagaccgtgtcaacaaggagagtaaaggaggaaaaggaagtgagccgtccagcttagccgcggt
tagtacaacattggatgccgcattctctcaggtctcgttagagccaaaacaagcagagaatgccccaggtagaaaagatg
cactgccagatccatacgaattcaatgccaaagttgaagatgggatcggagtgccagtgaaaaaaatcaaatctgaaaag
gacaaggtggatggtcatgtgactgatgctacagttgaccgatgtgtcggtacagaattacgtcatgtcggcacagagat
ggacccggactgtcttggaccatgtgacccagggacacaggtcacccttgatggaatagtatggcaggaaactgatgcag
gtgttttggtagtgaatgtaacatggagagggaagacgtatgtgggaactctccttgatgctaccaagcatgactgggca
cctccaaggccaaactgtgattctccaatcagtgactttgagactagaacaccaaagggccgtgcgaagcgtggtagagg
ggcatctgttggtaccccagtcaatgacaaactcctggagggtcgaaaacttcgcaagggtagaaggggaagcagtgtca
acagtaacactttccaagcaccaccaagccctgcaaagtcagacacgggaacacccagtggtggtgtaaaaaggaagggc
agacctcaggagaatgaccccaccgaaaaagctaataagcgtagtcgttcatgttctagaggaactccaagtaatgaaag
cagcaattcaaatacctctgtgatgctagagtgccccgagccaaactgcaacaaaaaatataaggactcaaatgccttga
aatatcaccagtcccacaaacacaatagttctagtcttataaatgtggatggtgacgatgattcacgagacaattgcctt
gataataatgaggattctatgctggatgatgtagacagcaatattggggatggtgatggtaaagtagacattgaaaacat
ggaagaggattctgtgtgtagctcttctgtaaatatgacacgtaaaaagtgtgatgaggagtctactgaaaaggaaagtg
aatgcaaagacaaaaaatcagaaaataccaaagaggaaactagtgctaataataaatgtgttagtgactctgcaacagag
atacaaaaacagaagaaagacacatctaatacgagtgtgatatctcctatcagtgtacagcaaccagtgaatgtgacaat
agctgctgctacaccgtttcatatagtgccaactccggtcccaagttttggtggtaccctgtctaccaccaagcctgggt
ctaccgtacagtcttcccctatacctgccaccatagtcactgccacacccatacaatcagctatacccatcacagtcaca
gctaccacaccccagatgttagacatcaaacatgatcataacaagccaacagaaaaactcatacgaccaaaatccaccgt
gaaccgtcccataatgccctcaaacatgattgcgctaactacaactgtaaatgttactcactctagcttaacaccagtca
cttcacatatgcccaccagttctacttcacagctcaagcctatccaacccaaaccaacaaagttaggggatcagcctgct
gtcaaccccgttctacttgaccttaatagggacaagaagctaaagccaaagaaaaagcttaaagataaggagcaagcagt
gacattacctactgcatcagtgtcttcctcacagttctctacctcgaattctacattcaattctacagggaagaagccac
ctgtaaagttagatggaaataaacacgagccacaaggagtcattaaagttgctcctattgtggcaagcaaacctattgaa
agcaacattcagaaatcagaagtcagccctctcccaaggactgatactgagataaagcattttggtgccaatgtaggagt
gattgcagcacaagttcagccaatgaaaggaattgacctttctcctcgaccgcctgatcaacaaccaagtgttctcaaag
tgacaccttcattacatattccgtcatcagatagcagtaagaatataacggatgatgtacagagtcctgcatattctgac
atttcagatgccaatgatgctggatctcctagtccaatgccacggagtgaaagtccccaagtcaaaatggaggagtccct
taacaaacctaaggaatctgtattaccgagtgctcatgtttctggagaaggacaatcaaattttggggtatacagtcagt
attatggacaatcaaattatctaatgtcaaatcttccccatgctcacagtccctccacaagtggtggcatacagaaacca
cctatagcagccgtgcaaggcaaggaccgaggggctgttggcgtggttgagggaaaggctaatgaggcacaaaacaggga
acggaaagaagaaaataaggaggagaaaaaggacggcagcagcagtaaaatggagggtatagttcccctcagtcatcccg
aataccatcagctccagcatcagaagtgggtacaacaacaacgtatgtacatacagacccttccacatcatgcacagtat
caatatatggcagcatatgggcctttcatggaccctacgtatcatatgcatatgatgtcaacggatccatattacaggca
acattttgaaaaaatgttagaagagcagaggagggcacaagatggtggccctcctaggaatgaatctgaggcagccagtc
gaccttcaagtaggtcatcaatggatttcagtcagggtcagagatcatcatctgctgggccatctggagcagatgacagc
aagtcattttcagggcgtatgagagaagaacagaggcgaccaagtgatcttagtatttctgacagtagggatcgcagtaa
ggaaaaagccagtgaaataaatcaacctccaaaagactctgtggataaatcttatctggaatcaagtgatccttataaaa
tgtctcatcagagaattatgtccgaggagcaacagagacgaataatgtttcaaaaacaaaagcttatcgaacaacagaaa
cgtgaagaacagagaaaagctgagggagataataaagtaactgactttgtcaataaaaattctgcaagtgctagtagtag
tagtgagagacgtgatatgaaaaaggatgtcaatcgtccagatttgatcaaacgcgaagttgatcaaaaatcaaaatcca
atcttgaaatgccagaatccaaaagtgcagtcgatgagaaaaatagatcaaatcttattaatgacaaacaacgtgctcta
gaaactcctaaaggcaaagttaacttaattaacaaggcatcaagtccccacactccttcatctagcatgccagtatccac
tcactccccatctatgggccctggatctccatacgccacacccttcatgtatcacagtcagtatatgcagtccccacctt
acagtcacatgcagtttgaccccatgtaccgaggggtcaatccgtctatgatgtatgcacctgcaggtccgtatctacac
cccacccaacttggttatcatgttggagtggaggagaacatggacaaagacaaacttcccatgggatctacatcaaaagt
gccaaatgaaagtgacagtaaaatttctgactctccatatattggtggagctagtggtcataaaatacatgaactacaag
agaaaggtcgtccctccccaaggactggatctccagtggcagggaaaggagacgggggtcatgttacacccacatccctg
tctggaagccttgacaagaatagagatttcagcaattcacctcctatccagcgtcacgttcacagtcatcatcatacaca
tgtagtggaagcagcatacccagtatatccttatacaggtaggtaa

Protein
Protein IDpfu_aug2.0_113.1_10282.t1
Definition-
>pfu_aug2.0_113.1_10282.t1
MSGLEHHSTVDKGLKMKIKRTKNAASSNSSKTDSSKHEIVKGGEKNSEKGSSSTADGSATNGSTSEKVKSTADKEKSPKA
KGMYRKDRVNKESKGGKGSEPSSLAAVSTTLDAAFSQVSLEPKQAENAPGRKDALPDPYEFNAKVEDGIGVPVKKIKSEK
DKVDGHVTDATVDRCVGTELRHVGTEMDPDCLGPCDPGTQVTLDGIVWQETDAGVLVVNVTWRGKTYVGTLLDATKHDWA
PPRPNCDSPISDFETRTPKGRAKRGRGASVGTPVNDKLLEGRKLRKGRRGSSVNSNTFQAPPSPAKSDTGTPSGGVKRKG
RPQENDPTEKANKRSRSCSRGTPSNESSNSNTSVMLECPEPNCNKKYKDSNALKYHQSHKHNSSSLINVDGDDDSRDNCL
DNNEDSMLDDVDSNIGDGDGKVDIENMEEDSVCSSSVNMTRKKCDEESTEKESECKDKKSENTKEETSANNKCVSDSATE
IQKQKKDTSNTSVISPISVQQPVNVTIAAATPFHIVPTPVPSFGGTLSTTKPGSTVQSSPIPATIVTATPIQSAIPITVT
ATTPQMLDIKHDHNKPTEKLIRPKSTVNRPIMPSNMIALTTTVNVTHSSLTPVTSHMPTSSTSQLKPIQPKPTKLGDQPA
VNPVLLDLNRDKKLKPKKKLKDKEQAVTLPTASVSSSQFSTSNSTFNSTGKKPPVKLDGNKHEPQGVIKVAPIVASKPIE
SNIQKSEVSPLPRTDTEIKHFGANVGVIAAQVQPMKGIDLSPRPPDQQPSVLKVTPSLHIPSSDSSKNITDDVQSPAYSD
ISDANDAGSPSPMPRSESPQVKMEESLNKPKESVLPSAHVSGEGQSNFGVYSQYYGQSNYLMSNLPHAHSPSTSGGIQKP
PIAAVQGKDRGAVGVVEGKANEAQNRERKEENKEEKKDGSSSKMEGIVPLSHPEYHQLQHQKWVQQQRMYIQTLPHHAQY
QYMAAYGPFMDPTYHMHMMSTDPYYRQHFEKMLEEQRRAQDGGPPRNESEAASRPSSRSSMDFSQGQRSSSAGPSGADDS
KSFSGRMREEQRRPSDLSISDSRDRSKEKASEINQPPKDSVDKSYLESSDPYKMSHQRIMSEEQQRRIMFQKQKLIEQQK
REEQRKAEGDNKVTDFVNKNSASASSSSERRDMKKDVNRPDLIKREVDQKSKSNLEMPESKSAVDEKNRSNLINDKQRAL
ETPKGKVNLINKASSPHTPSSSMPVSTHSPSMGPGSPYATPFMYHSQYMQSPPYSHMQFDPMYRGVNPSMMYAPAGPYLH
PTQLGYHVGVEENMDKDKLPMGSTSKVPNESDSKISDSPYIGGASGHKIHELQEKGRPSPRTGSPVAGKGDGGHVTPTSL
SGSLDKNRDFSNSPPIQRHVHSHHHTHVVEAAYPVYPYTGR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495