Gene
| Gene Model ID | pfu_aug2.0_113.1_10283 |
|---|---|
| Locus | scaffold113.1 : 184522 ... 194521 : - |
| To GenomeBrowser | scaffold113.1:184522..194521 |
| Genes list of scaffold | scaffold113.1 |
| Synonym | pfu_aug1.0_1357.1_22561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_113.1_10283.t1 | 2 | 1 | Use1 | 3 | 69 | 0.0 | 170.0 | 4.9e-21 | 6.6e-18 | 65.0 |
| pfu_aug2.0_113.1_10283.t1 | 2 | 2 | Use1 | 70 | 172 | 0.0 | 170.0 | 1.7e-34 | 2.3e-31 | 109.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_113.1_10283.t1 | gi|524870531|ref|XP_005092050.1| | PREDICTED: vesicle transport protein USE1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_113.1_10283.t1 | gi|676421711|ref|XP_009043841.1| | hypothetical protein LOTGIDRAFT_102889 [Lottia gigantea] | 1.0e-34 |
| pfu_aug2.0_113.1_10283.t1 | gi|731260498|ref|XP_010642670.1| | PREDICTED: vesicle transport protein USE1 [Fukomys damarensis] | 1.0e-30 |
| pfu_aug2.0_113.1_10283.t1 | gi|470635572|ref|XP_004323302.1| | PREDICTED: vesicle transport protein USE1 [Tursiops truncatus] | 3.0e-27 |
| pfu_aug2.0_113.1_10283.t1 | gi|196001327|ref|XP_002110531.1| | hypothetical protein TRIADDRAFT_54646 [Trichoplax adhaerens] | 1.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_113.1_10283.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10283.t1 atggccacgcgactcgaaataaattttaaccgtctgctagcaagatgcgaaagtatcgcaaagaacagagacacatggga ctggagggttgaaaagtatgttgctgcactacaagatcagttagcagacttaaagaaatcaccatgtaaaccatcacagg agtgcttgactgattataaggaggagtctgaattacgacacagaaaagttgagaaggaaagtgacatagacaccttgata cagcatgagagacagaaacatgaaaaacttgccgaggagatgttacacttaacacgcaatctaaaacagagcgtcaagga ctctggtaaaattgtattggatgataataagaaattgacggaaagttccaaagttatggactcaaattacagtggattga aaaaagaaagtgaacgccttgagaagcacacacaaacttgtagctggtggatctgggttatgttggcattagtgaccttc acctttctgtttatgattgtgtttataaggctgtttggtaaaaagagatga |
|
Protein
| Protein ID | pfu_aug2.0_113.1_10283.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10283.t1 MATRLEINFNRLLARCESIAKNRDTWDWRVEKYVAALQDQLADLKKSPCKPSQECLTDYKEESELRHRKVEKESDIDTLI QHERQKHEKLAEEMLHLTRNLKQSVKDSGKIVLDDNKKLTESSKVMDSNYSGLKKESERLEKHTQTCSWWIWVMLALVTF TFLFMIVFIRLFGKKR |
|