Gene
| Gene Model ID | pfu_aug2.0_113.1_10287 |
|---|---|
| Locus | scaffold113.1 : 252882 ... 270651 : + |
| To GenomeBrowser | scaffold113.1:252882..270651 |
| Genes list of scaffold | scaffold113.1 |
| Synonym | pfu_aug1.0_13894.1_39564 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_113.1_10287.t1 | 2 | 1 | A2M_N_2 | 278 | 326 | 3.6e-14 | 52.7 | 9.1e-06 | 0.067 | 12.9 |
| pfu_aug2.0_113.1_10287.t1 | 2 | 2 | A2M_N_2 | 638 | 687 | 3.6e-14 | 52.7 | 4.1e-13 | 3.1e-09 | 36.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_113.1_10287.t1 | gi|676445120|ref|XP_009050652.1| | hypothetical protein LOTGIDRAFT_238975 [Lottia gigantea] | 2.0e-38 |
| pfu_aug2.0_113.1_10287.t1 | gi|524895406|ref|XP_005104186.1| | PREDICTED: alpha-2-macroglobulin-like [Aplysia californica] | 6.0e-24 |
| pfu_aug2.0_113.1_10287.t1 | gi|350402871|ref|XP_003486632.1| | 3.0e-15 | |
| pfu_aug2.0_113.1_10287.t1 | gi|665798003|ref|XP_008546856.1| | PREDICTED: alpha-2-macroglobulin-like protein 1 isoform X1 [Microplitis demolitor] | 6.0e-15 |
| pfu_aug2.0_113.1_10287.t1 | gi|665798005|ref|XP_008546857.1| | PREDICTED: alpha-2-macroglobulin-like protein 1 isoform X2 [Microplitis demolitor] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_113.1_10287.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10287.t1 atgtattatcgagtaagagaagataccatgagctactctcttggtcatctggtgaccgtatccagaaatctatggagtgg ggagaggtttaagtactgtgtgactttcccaaggaatgctgatttagaatcaggtccagtctcagaactgactgttggaa tcacactcacaaaccaggaaatcaaaatcacaacacactatgacaaagtccagtacttttcagttgatggggagagcagg tgctatgaccttacagccccagatttacctggacgatacaacttcacagctaacctgacggctaactttgggtcatacat agcatcacaggtgtatacatcagatgctactatccatgattcctccatacaaagtgtgacactggtacagacagacaaac ctttgtacaagccaggacagatgggaactgtattgaagggtcagtctaaaggcccagagatgaaattctacccttttgag ttgaagatggaggatgataccaataattacttcaaatctgtgtttccctacaaaggaagggtgacagccattcgtccaga tggcagccctgcagcaggggagataatccaggtatcagtagaggactataactgggatgaaccttgggccttaaagaagg attttgttacagatagcaatggtaaagtggagttcagtatagaggatgtacctgaaaacattactaggttcagtgttcag gcaaaggcaatagaatacgtgtcagactatcgtaccagagcaatcttacagctatatcaaccatcagcatatatgtatgt tcgtagatggttctctccatcagaaagcttcattcaaatcgaggacataacggaacctgttaaatgtggacaggacttga agctcggtgtcctttactctacccctccagactcacgctacaagatgcatgttattgtaactgaaggatcagagatggtg tataccaaccatcacactcatcacttcaagattcatgatgccgtaaactttgagaccgtggataaatctagctacttaga gagatactttcccaccagacccccaccttttgtacaaccacctctacctcccctcataccaataaatattacatcagatg acaatgagacagaaccagtgcccgtcgtagaggatcctattgtaccagaggaggtacagccactgatactgaacaggaga agaagacagacaagtggttgtgtggatatggatggtaagacagtggctgtagatgacatgtacaaaccagatagtacaaa cccttgtaagacatgtgtatgtagtgatactgacgaggaggaaacctgcttcacggccatgtgtgtgccacctacctgtc ctaactacaaaatgagggaaaaagaatgctgtgcttgggactgcctggatgataacggaaatgttataccaccaatgatt cctgaagtggaaccaccacccccaccacctaaaggttgtgtcgacagggatggtatgagtattaatcatggagacaggta cataccatcacaaagtaatccatgtaatagctgctcatgtaataacggacagaaggatagctgtcaaaccatctactgtt caccgcctccatgccaagactacttacctatacacggtacctgctgtggatttgtctgtcctgcagatataggagatggt tgtttggacaaggacaacaacctgatagcagatggtgacgtgtatcatccaaataaatctaacgtatgtcagagctgtgt gtgtaacaaaggtcagcctgagaggtgtgcgatgatcatgtgtgatgctccaccctgtccatactataaacttatagagg gcacctgctgtggatttacgtgcctcgacgctccagaacccccagagccgccagctttacagaagaacaatcatatcgct cgtatgtacctgtccataccaattacatcagccatggcaccaaggtcaaaggtcatggtatactatgtaagagatgacat ggagacggtggcaacaagtagagaattcaccgtggagaaatgcctagataaccaggtacactttattaagcatttttga |
|
Protein
| Protein ID | pfu_aug2.0_113.1_10287.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10287.t1 MYYRVREDTMSYSLGHLVTVSRNLWSGERFKYCVTFPRNADLESGPVSELTVGITLTNQEIKITTHYDKVQYFSVDGESR CYDLTAPDLPGRYNFTANLTANFGSYIASQVYTSDATIHDSSIQSVTLVQTDKPLYKPGQMGTVLKGQSKGPEMKFYPFE LKMEDDTNNYFKSVFPYKGRVTAIRPDGSPAAGEIIQVSVEDYNWDEPWALKKDFVTDSNGKVEFSIEDVPENITRFSVQ AKAIEYVSDYRTRAILQLYQPSAYMYVRRWFSPSESFIQIEDITEPVKCGQDLKLGVLYSTPPDSRYKMHVIVTEGSEMV YTNHHTHHFKIHDAVNFETVDKSSYLERYFPTRPPPFVQPPLPPLIPINITSDDNETEPVPVVEDPIVPEEVQPLILNRR RRQTSGCVDMDGKTVAVDDMYKPDSTNPCKTCVCSDTDEEETCFTAMCVPPTCPNYKMREKECCAWDCLDDNGNVIPPMI PEVEPPPPPPKGCVDRDGMSINHGDRYIPSQSNPCNSCSCNNGQKDSCQTIYCSPPPCQDYLPIHGTCCGFVCPADIGDG CLDKDNNLIADGDVYHPNKSNVCQSCVCNKGQPERCAMIMCDAPPCPYYKLIEGTCCGFTCLDAPEPPEPPALQKNNHIA RMYLSIPITSAMAPRSKVMVYYVRDDMETVATSREFTVEKCLDNQVHFIKHF |
|