Gene
| Gene Model ID | pfu_aug2.0_113.1_10291 |
|---|---|
| Locus | scaffold113.1 : 311990 ... 343721 : - |
| To GenomeBrowser | scaffold113.1:311990..343721 |
| Genes list of scaffold | scaffold113.1 |
| Synonym | pfu_aug1.0_58.1_07336 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_113.1_10291.t2 | 1 | 1 | RVT_1 | 42 | 222 | 1.4e-23 | 83.3 | 1.4e-27 | 2.0e-23 | 82.8 |
Transcript
| Transcript ID | pfu_aug2.0_113.1_10291.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10291.t1 atgcgtgcgtgttttgtgaaaatcaaagaagacgaagcaatcatcagagtatcaccaaaccttccacaaaggtttcacat agggagagaattattcaagttggccatcaccatagactccattgcccgcaccctggatgaaagaggtcaagtggacatag tgttgcttgactttgctaaagcatttgacaaagtcccccaccagaggttgctccacaaactacagtttaatggtgttcgg aacaagaccctccgatggatagaggacttccttaacaacagacagcaacaggtcctggatggccacacctcctccgcccc agatgtcctgtctggagtcccgcagggaacggtgctcggcccgctgctcttcctctcattcatcaacaacttaccagagg tcaccaaatcagaggctcgcctatttgcagacgactgtttactgttctgcccagtcaaaagtgccgctgacagtcagaca ttgcagcaggacctggcagcccttgcggaatgtgagaaggagtggcaaatggcgttccatccagagaggtgtgtggtaca tgtaatacaagtggcatccaagcgcagagtcatcagtgcggactacaccttacacaaccatcatcttgaggtagtagact cgagtaaatacctgggtataaccatcagcaacacactggagtgggataggcacattgataacatcactgccaaagcgaac agaactcttggctccctcaaacgaaacctaagggggtgcagaacaacagcacgagccagagcatacgagacgatcgtaag acccacattggaatatgctgcttcaatatgggatcctcagagcatcaaacaggttacccaggtagaaaaagttcaacgcg gagcagcccgatttgctaccaggaactattgggaccgacaaccaggtagtgtttcaagcatgatcaccgctttgggatgg gaatcactacaagtccggagagttaagatccgcctcctactgctgttcaagatccaacagaacctggtagcaattccagc cgactactacctcatgcagtctgatagcagaacaagaggtcagcataccttccgcataccaacggctaggaaggatgtat actga |
|
| Transcript ID | pfu_aug2.0_113.1_10291.t2 |
| Definition | - |
>pfu_aug2.0_113.1_10291.t2 atgcgtgcgtgttttgtgaaaatcaaagaagacgaagcaatcatcagagtatcaccaaaccttccacaaaggtttcacat agggagagaattattcaagttggccatcaccatagactccattgcccgcaccctggatgaaagaggtcaagtggacatag tgttgcttgactttgctaaagcatttgacaaagtcccccaccagaggttgctccacaaactacagtttaatggtgttcgg aacaagaccctccgatggatagaggacttccttaacaacagacagcaacaggtcctggatggccacacctcctccgcccc agatgtcctgtctggagtcccgcagggaacggtgctcggcccgctgctcttcctctcattcatcaacaacttaccagagg tcaccaaatcagaggctcgcctatttgcagacgactgtttactgttctgcccagtcaaaagtgccgctgacagtcagaca ttgcagcaggacctggcagcccttgcggaatgtgagaaggagtggcaaatggcgttccatccagagaggtgtgtggtaca tgtaatacaagtggcatccaagcgcagagtcatcagtgcggactacaccttacacaaccatcatcttgaggtagtagact cgagtaaatacctgggtataaccatcagcaacacactggagtgggataggcacattgataacatcactgccaaagcgaac agaactcttggctccctcaaacgaaacctaagggggtgcagaacaacagcacgagccagagcatacgagacgatcgtaag acccacattggaatatgctgcttcaatatgggatcctcagagcatcaaacaggttacccaggtagaaaaagttcaacgcg gagcagcccgatttgctaccaggaactattgggaccgacaaccaggtagtgtttcaagcatgatcaccgctttgggatgg gaatcactacaagtccggagagttaagatccgcctcctactgctgttcaagatccaacagaacctggtagcaattccagc cgactactacctcatgcagtctgatagcagaacaagagctaaggcatctaacttttatgaataa |
|
Protein
| Protein ID | pfu_aug2.0_113.1_10291.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10291.t1 MRACFVKIKEDEAIIRVSPNLPQRFHIGRELFKLAITIDSIARTLDERGQVDIVLLDFAKAFDKVPHQRLLHKLQFNGVR NKTLRWIEDFLNNRQQQVLDGHTSSAPDVLSGVPQGTVLGPLLFLSFINNLPEVTKSEARLFADDCLLFCPVKSAADSQT LQQDLAALAECEKEWQMAFHPERCVVHVIQVASKRRVISADYTLHNHHLEVVDSSKYLGITISNTLEWDRHIDNITAKAN RTLGSLKRNLRGCRTTARARAYETIVRPTLEYAASIWDPQSIKQVTQVEKVQRGAARFATRNYWDRQPGSVSSMITALGW ESLQVRRVKIRLLLLFKIQQNLVAIPADYYLMQSDSRTRGQHTFRIPTARKDVY |
|
| Protein ID | pfu_aug2.0_113.1_10291.t2 |
| Definition | - |
>pfu_aug2.0_113.1_10291.t2 MRACFVKIKEDEAIIRVSPNLPQRFHIGRELFKLAITIDSIARTLDERGQVDIVLLDFAKAFDKVPHQRLLHKLQFNGVR NKTLRWIEDFLNNRQQQVLDGHTSSAPDVLSGVPQGTVLGPLLFLSFINNLPEVTKSEARLFADDCLLFCPVKSAADSQT LQQDLAALAECEKEWQMAFHPERCVVHVIQVASKRRVISADYTLHNHHLEVVDSSKYLGITISNTLEWDRHIDNITAKAN RTLGSLKRNLRGCRTTARARAYETIVRPTLEYAASIWDPQSIKQVTQVEKVQRGAARFATRNYWDRQPGSVSSMITALGW ESLQVRRVKIRLLLLFKIQQNLVAIPADYYLMQSDSRTRAKASNFYE |
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