Gene
| Gene Model ID | pfu_aug2.0_113.1_10292 |
|---|---|
| Locus | scaffold113.1 : 343822 ... 367955 : + |
| To GenomeBrowser | scaffold113.1:343822..367955 |
| Genes list of scaffold | scaffold113.1 |
| Synonym | pfu_aug1.0_58.1_07335 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_113.1_10292.t1 | 12 | 1 | WD40 | 11 | 42 | 0.0 | 167.1 | 1.0e-06 | 0.0078 | 16.0 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 2 | WD40 | 53 | 84 | 0.0 | 167.1 | 0.00019 | 1.4 | 8.9 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 3 | WD40 | 97 | 123 | 0.0 | 167.1 | 0.0018 | 13.0 | 5.8 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 4 | WD40 | 139 | 172 | 0.0 | 167.1 | 3.0e-06 | 0.022 | 14.6 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 5 | WD40 | 186 | 223 | 0.0 | 167.1 | 4.3e-09 | 3.2e-05 | 23.6 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 6 | WD40 | 231 | 252 | 0.0 | 167.1 | 0.27 | 2000.0 | -1.1 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 7 | WD40 | 438 | 468 | 0.0 | 167.1 | 0.011 | 82.0 | 3.3 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 8 | WD40 | 506 | 548 | 0.0 | 167.1 | 4.3e-10 | 3.2e-06 | 26.8 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 9 | WD40 | 576 | 601 | 0.0 | 167.1 | 0.026 | 200.0 | 2.1 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 10 | WD40 | 613 | 650 | 0.0 | 167.1 | 1.1e-13 | 7.8e-10 | 38.2 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 11 | WD40 | 665 | 691 | 0.0 | 167.1 | 0.44 | 3300.0 | -1.8 |
| pfu_aug2.0_113.1_10292.t1 | 12 | 12 | WD40 | 697 | 733 | 0.0 | 167.1 | 3.6e-11 | 2.7e-07 | 30.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_113.1_10292.t1 | gi|524902830|ref|XP_005107638.1| | PREDICTED: uncharacterized protein LOC101855522 [Aplysia californica] | 0.0 |
| pfu_aug2.0_113.1_10292.t1 | gi|260831498|ref|XP_002610696.1| | hypothetical protein BRAFLDRAFT_117940 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_113.1_10292.t1 | gi|390355851|ref|XP_001180017.2| | 0.0 | |
| pfu_aug2.0_113.1_10292.t1 | gi|632948466|ref|XP_007889613.1| | PREDICTED: probable U3 small nucleolar RNA-associated protein 13 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_113.1_10292.t1 | gi|195995541|ref|XP_002107639.1| | hypothetical protein TRIADDRAFT_51347 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_113.1_10292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10292.t1 atggcgatggaaaaagtttatgtcaagcgggatacacacacacgctccataacagcgataggttataatcctgctcggcg tgaaataatgataggatgtgaagatggtgttattaagttctgggaggcagagggtctgaagttgtcaatgacagccaatg agcacagaggctgggttacagacttcctttactgggcaagtccaaagctgatgctgtctgcagcaaacgatggtaacatc atagcatggtcaacggcaggaacggtgcatgatcttataccgattggacagcctgtatactgtatggcaatcaatcagag acgtgaacaattggtatgtggagttaacggaagtatcagggtgtatagtctagatgaagagaaggaatcaggtcatgtga tcaatatccaggttttatatgttgcaagggaacatacagacattgtaaggtgcattgtttcccatgagtcaagaatttac tctgcagggtatgaccagcagattattatatacgactcgtcatataccagagataacagtttggaacctatctttcaagt aaatcaagcacatgatgcaggtatttgctgcatgttgttagaaaaagacaatgagaataatcaatggataatgacaggtt cttttgacaagaccgtgaagatttggtccattgatggtaaatttatagtaaagctggataacttcttatcaacagtcact ggaatatgttatgtaccacggaacaagactgtttgggtagctgggggaacctcctacgccagcttgtttgatcccaaatc tggggataatgtatcagattttatagggaccttccagcaacaagaagaggagaaataccaactacaaatcttaaagtact tcccagaactgaatgttgttatatcatccaccagcagacgacatttgattgtatggaagtataattcctcaggctgtatt actgctctgaaatgccgtactcagctggagagcttatgctacacaaagaaggtgccaattttgattttctctggtgataa tgaaggtgtaataataaagtgggaaaggatgcaatcaaatcatttcatgtacagcaaagagttataccagctgagtgaca acaaacttaagaagcagaagaaggttgggagtaaagccagggagttgatgttagaacagcagttaaatcaggcccctact cacgtggtggatccactcacaaaggatgaggatgccaagaaggcaaaaccctccagtggcaaaaatatccgcagccacta cgcctttaacaaacctctaataccaccaatatctgttcataatcaccccaatacaaccatactgaaggtggtttttgtgg agagatatgattacatcatagcagcatcagaggatagtaatatataaaactcaaagctaggcattatcagatcagacgaa gctgaggaggaagaaatggagatcagcagtacaacatcggaatctgactctgtgacgaatcgtgtggcaggatttgtttg caagtatgtgtttgcggagcacacaagttgtgtgaccagcttagtggtgattggtaaagagcacaatctgcaatccacct acatgctaagtggaggatgggacaaaagaatatgtatctggaatctggagaatggagtgatggagggtatattccgtaac acagccccaggggcacctttagagagtcaggaactggcgtgcgacggtgttatcatggatatggactactcacctaaaca caatgaatttgcctatgcatcaagtgacaagatggtgtacataaggaagttttctacaaatggtgctaagatgaccttgg tcaatacgttacaaggtcatgaaggggagattacctcagtgaggtggaatcctcacaatgacgggacatgggtgacaggt tcagaggattctaccattagaatatggtctggttctggtttaaacgagtgtgagtatgtgttgtcaacaaagacaggcgt gtgctgtatgtgtatagacaagataaatggaagtataatagctggtgctcaatcatacatcaaggtgtatgatccagaat catttcgcttagttcaaacaaatgtaggtcatcaggacgctatcagaagtattatccacattcctgaacgcaatcagtat gtctcatgttcctgggataagacaatcagagtgtggaatgcatggaagaaaccaaaaaggaaacgtatcgcgaagacgga cgataaaggacagccgatcggtaatacatcggccgaaaatatggcctcagaggacaaatcacaaactcccgacaaaaaag ttgtgttcactgatgtggaaggaggagagatggaaaaaatcgtggaagaagaagaagatggtcatcatgaagaagtagaa gaggaagaataa |
|
Protein
| Protein ID | pfu_aug2.0_113.1_10292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10292.t1 MAMEKVYVKRDTHTRSITAIGYNPARREIMIGCEDGVIKFWEAEGLKLSMTANEHRGWVTDFLYWASPKLMLSAANDGNI IAWSTAGTVHDLIPIGQPVYCMAINQRREQLVCGVNGSIRVYSLDEEKESGHVINIQVLYVAREHTDIVRCIVSHESRIY SAGYDQQIIIYDSSYTRDNSLEPIFQVNQAHDAGICCMLLEKDNENNQWIMTGSFDKTVKIWSIDGKFIVKLDNFLSTVT GICYVPRNKTVWVAGGTSYASLFDPKSGDNVSDFIGTFQQQEEEKYQLQILKYFPELNVVISSTSRRHLIVWKYNSSGCI TALKCRTQLESLCYTKKVPILIFSGDNEGVIIKWERMQSNHFMYSKELYQLSDNKLKKQKKVGSKARELMLEQQLNQAPT HVVDPLTKDEDAKKAKPSSGKNIRSHYAFNKPLIPPISVHNHPNTTILKVVFVERYDYIIAASEDSNIXNSKLGIIRSDE AEEEEMEISSTTSESDSVTNRVAGFVCKYVFAEHTSCVTSLVVIGKEHNLQSTYMLSGGWDKRICIWNLENGVMEGIFRN TAPGAPLESQELACDGVIMDMDYSPKHNEFAYASSDKMVYIRKFSTNGAKMTLVNTLQGHEGEITSVRWNPHNDGTWVTG SEDSTIRIWSGSGLNECEYVLSTKTGVCCMCIDKINGSIIAGAQSYIKVYDPESFRLVQTNVGHQDAIRSIIHIPERNQY VSCSWDKTIRVWNAWKKPKRKRIAKTDDKGQPIGNTSAENMASEDKSQTPDKKVVFTDVEGGEMEKIVEEEEDGHHEEVE EEE |
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