Gene
| Gene Model ID | pfu_aug2.0_113.1_10297 |
|---|---|
| Locus | scaffold113.1 : 441662 ... 459344 : + |
| To GenomeBrowser | scaffold113.1:441662..459344 |
| Genes list of scaffold | scaffold113.1 |
| Synonym | pfu_aug1.0_21978.1_33230 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_113.1_10297.t1 | 2 | 1 | CENP-H | 10 | 30 | 3.0e-13 | 49.8 | 3.5 | 4700.0 | -2.3 |
| pfu_aug2.0_113.1_10297.t1 | 2 | 2 | CENP-H | 68 | 165 | 3.0e-13 | 49.8 | 2.2e-16 | 3.0e-13 | 49.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_113.1_10297.t1 | gi|260809887|ref|XP_002599736.1| | hypothetical protein BRAFLDRAFT_105174 [Branchiostoma floridae] | 6.0e-17 |
| pfu_aug2.0_113.1_10297.t1 | gi|156396982|ref|XP_001637671.1| | predicted protein [Nematostella vectensis] | 4.0e-11 |
| pfu_aug2.0_113.1_10297.t1 | gi|115933439|ref|XP_786763.2| | PREDICTED: centromere protein H [Strongylocentrotus purpuratus] | 1.0e-10 |
| pfu_aug2.0_113.1_10297.t1 | gi|524895773|ref|XP_005104368.1| | PREDICTED: centromere protein H-like [Aplysia californica] | 4.0e-08 |
| pfu_aug2.0_113.1_10297.t1 | gi|584085617|ref|XP_006762544.1| | PREDICTED: centromere protein H, partial [Myotis davidii] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_113.1_10297.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10297.t1 atggcttctctaccagatgccctcttagaactgagggaaatccacagtgacatagacactaaagaagttgttatgaaaag gttacagcatggtgatgtcctagtgaaggaactgtttggtgctcctggtgaggaccctaaaccattgactccacaaagac aatatcttcaggaatgctttgagaagcaatgtgctttggtatctgaaatttcaaagaaattaaaaacaatagaagattta aagactagaagtacaaacttaaagaaagacaattttgaattaaaaacagaaagtagaaaactgatgagtgaacttaaaga taagagggcagccaagaaagacacattttctagagaaactaaaagcttgtgtgaagaattggacaaagtgaatcagagaa atgctgccacccgaggaattctacagggacttattataggtagtggagtgaactgggccaaggactcacacctagaggag ctggtgatgaagctgagcagtacagatatatga |
|
Protein
| Protein ID | pfu_aug2.0_113.1_10297.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_113.1_10297.t1 MASLPDALLELREIHSDIDTKEVVMKRLQHGDVLVKELFGAPGEDPKPLTPQRQYLQECFEKQCALVSEISKKLKTIEDL KTRSTNLKKDNFELKTESRKLMSELKDKRAAKKDTFSRETKSLCEELDKVNQRNAATRGILQGLIIGSGVNWAKDSHLEE LVMKLSSTDI |
|