Gene
| Gene Model ID | pfu_aug2.0_1132.1_08179 |
|---|---|
| Locus | scaffold1132.1 : 69196 ... 86594 : + |
| To GenomeBrowser | scaffold1132.1:69196..86594 |
| Genes list of scaffold | scaffold1132.1 |
| Synonym | pfu_aug1.0_4675.1_37942 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1132.1_08179.t1 | 2 | 1 | Fibrinogen_C | 42 | 110 | 4.3e-40 | 137.7 | 1.3e-27 | 6.3e-24 | 84.8 |
| pfu_aug2.0_1132.1_08179.t1 | 2 | 2 | Fibrinogen_C | 108 | 185 | 4.3e-40 | 137.7 | 3.6e-20 | 1.8e-16 | 60.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1132.1_08179.t1 | gi|637247278|ref|XP_008107220.1| | PREDICTED: veficolin-1-like isoform X2 [Anolis carolinensis] | 2.0e-33 |
| pfu_aug2.0_1132.1_08179.t1 | gi|564262797|ref|XP_006270272.1| | PREDICTED: ryncolin-3-like [Alligator mississippiensis] | 4.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_1132.1_08179.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1132.1_08179.t1 atgaacggatcgatgatagtttctgttcagcagaagtataaagtgccattaagtgggagcgtgaaaggaaaaggattttt cgctgcaaaacttagctcctgcacagtgatcaaatctaaaagaccatcagctgaggatggtgtgtataccatatatcctg acggagatacgccaaagaaagcgttttgtgatatgtcaacagaaggaagtggatggacggtctttcaaaagcgaaaagac ggaaccgttaatttttatagaacctggaaggaatataaaaatggatttgggaaacattatggagaatattggttaggagg agatgcctttacatatcataaaggaatgaagttttcaacatacgacagagacaacgatgctcggtataaggggcactgtg ctgaaaccaatgctggagcatggtggtataggagctgtgatcattcgaacctcaatggtctaaatgggaaagtgggagga aaatacatcatctgggagaaatggaacaacaaaaacaaggccgcttatgtgcagaagacaaaaatgatgataaagtgtta a |
|
Protein
| Protein ID | pfu_aug2.0_1132.1_08179.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1132.1_08179.t1 MNGSMIVSVQQKYKVPLSGSVKGKGFFAAKLSSCTVIKSKRPSAEDGVYTIYPDGDTPKKAFCDMSTEGSGWTVFQKRKD GTVNFYRTWKEYKNGFGKHYGEYWLGGDAFTYHKGMKFSTYDRDNDARYKGHCAETNAGAWWYRSCDHSNLNGLNGKVGG KYIIWEKWNNKNKAAYVQKTKMMIKC |
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