Gene
| Gene Model ID | pfu_aug2.0_1132.1_08182 |
|---|---|
| Locus | scaffold1132.1 : 146907 ... 163615 : - |
| To GenomeBrowser | scaffold1132.1:146907..163615 |
| Genes list of scaffold | scaffold1132.1 |
| Synonym | pfu_aug1.0_6895.1_45533 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium-dependent neutral amino acid transporter b at3 | GO:0015293 GO:0016020 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1132.1_08182.t1 | 2 | 1 | SNF | 80 | 538 | 0.0 | 577.1 | 0.0 | 0.0 | 539.3 |
| pfu_aug2.0_1132.1_08182.t1 | 2 | 2 | SNF | 615 | 706 | 0.0 | 577.1 | 4.6e-15 | 3.4e-11 | 42.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1132.1_08182.t1 | gi|524907345|ref|XP_005108791.1| | PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1132.1_08182.t1 | gi|752882142|ref|XP_011258705.1| | PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3 isoform X2 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_1132.1_08182.t1 | gi|752882140|ref|XP_011258704.1| | PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3 isoform X1 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_1132.1_08182.t1 | gi|665806565|ref|XP_008551529.1| | PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_1132.1_08182.t1 | gi|759038661|ref|XP_011351871.1| | PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT3 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1132.1_08182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1132.1_08182.t1 atggaacgaattgataaggaacgaattgaattgaatagtattccggaagacgagccgactgctcctacccccggggaacg gtcacgtgggaatggggaggaggaaagacgctcactacaggtacccagtccgggacagtcctatgggagtaccctaagta tagagcctgacgcatcgacggctaatttactacgcattgatttggagcagaagcttaacagacatacaggcgaagagagg gagacatgggggagtcgggcagagttcctgctgtccttggtggggtacgccgtggggttggggaacgtatggagattccc ttacttgacacagaaaaatggcggtggtgctttccttataccctatgccatcatgttagccgtcgagggaattcctctat tttacctagagcttgcaataggtcaaagactacagcttgcaataggtcaaagactacgtaagggtgcggtaggggcgtgg aaccaagtatccccgtatcttcagggcctcggattggcgtcagcagcggtatccttcaatgtagcgctctactataatac aatcattgcgtggtgcatactctaccttgtgcagagttttcaaagtcctctaccgtggtctgaatgtccactgcgcatga tcggaaatgtgacgagaaaagacccggaatgtgagagaagtggaccaaccacctatttttggtacagagagacattaaac attgcgccgtccgtggaatcaggaagttccatcaactggaagatggcactatcattgtttgctgcatggattattgtgta tttgtgtatgataaaaggcatcaaatcgtcaggaaaggttgtttacgtcacggccacttttccatatttggtgttgatta tattcttctttcgtggtattactctacacggctttgagagaggactggaacacctgtttatacctaagtggagtaagttg ttcgagccggaggtatggttggacgcagctactcagatcttctactcctttggtctggctttcggctgcctcatcgctct agcttcttacaatccggtccggagtaacttcgctcaagaagccctgattgtcacaattgccgacttctttacctctatat ttactgcttctgttgttttttgtatacttggttttaaagctactattacctatgaaaattgtctgagggaggaacaagag acagcgagcaacaaatctacatctaactgcgattttactaccatcattgaagagtccggatccggaacaggattggcttt catcgcatttacagaggccatcaatcagtttccggtggcgcagctttggtccgtccttttcttcctcatgctattcacgc ttggtttggacagtatgtttggcacgctagaaggagcactgacctctataaacgacatgatgttgttccctacagtcagg agagaaatcacttgtggtttagtatgtctggtgtcctttctgatttccctctgtttcaccacgaccacaggggcctacgt cttctctctgtttgattccttctgtgccaacataccactacttattatagctttctttgaatgtattgccatatcatata tctatggtttgaaaagcgatgactataacaacgatgacaataatgaggattgcaacgatgacgatgacaagaatgatgat gacaacgatgacaatgacaatgatgttgattacaacgatgacgatgacatcgatgatgatgacaacgatagcgatgacaa taatgacgatgataacgatgaagatgacaataatgatgatgatgataatggtgacgataaaaatgatgatattttcttgt tttccagattgagtgatgatatagagttgatgataggaagccgtcctagttatttttggttgatgtgctggcgttatgta ggtcctttagccatgatcgttatatttggggccagtatcatagaaatgttctctcaaggattactttacgaagtctggga tgcagcaaagggttatactgtaatcattccatggccgtggtggtgccagctactagcagtagtattaatactatcgtctg ctctgtggataccaggtgtcgctgcagcaaagtacttccggtgggtcacgtggaaagaggaagtgccagctttctttccg gaagatgaacttgcagaagaacgaaatattaaagagcataaatcgaactatatcgaaaaatctctgtttggttttaaatg a |
|
Protein
| Protein ID | pfu_aug2.0_1132.1_08182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1132.1_08182.t1 MERIDKERIELNSIPEDEPTAPTPGERSRGNGEEERRSLQVPSPGQSYGSTLSIEPDASTANLLRIDLEQKLNRHTGEER ETWGSRAEFLLSLVGYAVGLGNVWRFPYLTQKNGGGAFLIPYAIMLAVEGIPLFYLELAIGQRLQLAIGQRLRKGAVGAW NQVSPYLQGLGLASAAVSFNVALYYNTIIAWCILYLVQSFQSPLPWSECPLRMIGNVTRKDPECERSGPTTYFWYRETLN IAPSVESGSSINWKMALSLFAAWIIVYLCMIKGIKSSGKVVYVTATFPYLVLIIFFFRGITLHGFERGLEHLFIPKWSKL FEPEVWLDAATQIFYSFGLAFGCLIALASYNPVRSNFAQEALIVTIADFFTSIFTASVVFCILGFKATITYENCLREEQE TASNKSTSNCDFTTIIEESGSGTGLAFIAFTEAINQFPVAQLWSVLFFLMLFTLGLDSMFGTLEGALTSINDMMLFPTVR REITCGLVCLVSFLISLCFTTTTGAYVFSLFDSFCANIPLLIIAFFECIAISYIYGLKSDDYNNDDNNEDCNDDDDKNDD DNDDNDNDVDYNDDDDIDDDDNDSDDNNDDDNDEDDNNDDDDNGDDKNDDIFLFSRLSDDIELMIGSRPSYFWLMCWRYV GPLAMIVIFGASIIEMFSQGLLYEVWDAAKGYTVIIPWPWWCQLLAVVLILSSALWIPGVAAAKYFRWVTWKEEVPAFFP EDELAEERNIKEHKSNYIEKSLFGFK |
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