Gene
| Gene Model ID | pfu_aug2.0_1132.1_08183 |
|---|---|
| Locus | scaffold1132.1 : 174190 ... 189103 : - |
| To GenomeBrowser | scaffold1132.1:174190..189103 |
| Genes list of scaffold | scaffold1132.1 |
| Synonym | pfu_aug1.0_6299.1_09307 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicle-associated membrane protein-associated protein partial | GO:0043229 GO:0044444 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1132.1_08183.t1 | 2 | 1 | Motile_Sperm | 2 | 89 | 6.2e-31 | 106.2 | 5.0e-34 | 9.3e-31 | 105.7 |
| pfu_aug2.0_1132.1_08183.t1 | 2 | 2 | Motile_Sperm | 116 | 134 | 6.2e-31 | 106.2 | 1.8 | 3300.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1132.1_08183.t1 | gi|699597267|ref|XP_009868646.1| | PREDICTED: vesicle-associated membrane protein-associated protein A, partial [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_1132.1_08183.t1 | gi|675614624|ref|XP_008936164.1| | PREDICTED: vesicle-associated membrane protein-associated protein A, partial [Merops nubicus] | 0.0 |
| pfu_aug2.0_1132.1_08183.t1 | gi|705697980|ref|XP_010124795.1| | PREDICTED: vesicle-associated membrane protein-associated protein A, partial [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_1132.1_08183.t1 | gi|723125252|ref|XP_010294930.1| | PREDICTED: vesicle-associated membrane protein-associated protein A, partial [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_1132.1_08183.t1 | gi|514709757|ref|XP_005011196.1| | PREDICTED: vesicle-associated membrane protein-associated protein A [Anas platyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1132.1_08183.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1132.1_08183.t1 gtcctttcacagatgttgtcacttcagacttgaagttgtcgaatccatcagagaggaaagtatgcttcaaagtgaagact acagcaccaaaacgatactgtgtacgtccaaacagtggtatgatagaccctggtcagacagtcaatgtatcagtaatgct tcagccatttgactatgatccacaggagaagaataaacacaagttcatggtacagacaatgtttgctccagagggcccta ttgagtcacaagatcagatgtggagggaggcagcgccagatagtttgatggactccaaattaaagtgtgtgttcgaaatg ccggtggaaaatgctcatcttgaacagactgttactagtaaaccagtttctgaagaaaaacccaaaccagccaaacaagt gcagatagaggcaactccccctacaaagtcttcaagtgtagaatctgatttacgcaagaaagacgaagaaattcaaagaa tgagagctgaacaagaaaggttgagagatgaaaatcgctcattaaaggaaagtgaagtaagattacgcaaggttgctatg gatagcactgtttcatcaacgccggcttccactaaaagtaccgaggaaacatcacaatcactggttacccaaagcctcag aggaccttatgccctttga |
|
Protein
| Protein ID | pfu_aug2.0_1132.1_08183.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1132.1_08183.t1 PFTDVVTSDLKLSNPSERKVCFKVKTTAPKRYCVRPNSGMIDPGQTVNVSVMLQPFDYDPQEKNKHKFMVQTMFAPEGPI ESQDQMWREAAPDSLMDSKLKCVFEMPVENAHLEQTVTSKPVSEEKPKPAKQVQIEATPPTKSSSVESDLRKKDEEIQRM RAEQERLRDENRSLKESEVRLRKVAMDSTVSSTPASTKSTEETSQSLVTQSLRGPYAL |
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