Gene
| Gene Model ID | pfu_aug2.0_1134.1_14807 |
|---|---|
| Locus | scaffold1134.1 : 2566 ... 60829 : + |
| To GenomeBrowser | scaffold1134.1:2566..60829 |
| Genes list of scaffold | scaffold1134.1 |
| Synonym | pfu_aug1.0_55999.1_70830 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leucine-rich repeat-containing protein | GO:0000166 GO:0043167 GO:0044237 GO:0044763 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1134.1_14807.t1 | 1 | 1 | Ras | 1678 | 1822 | 1.3e-12 | 47.4 | 1.2e-15 | 2.8e-12 | 46.2 |
| pfu_aug2.0_1134.1_14807.t1 | 1 | 1 | Miro | 1678 | 1796 | 5.6e-11 | 42.9 | 6.8e-14 | 1.7e-10 | 41.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1134.1_14807.t1 | gi|524908742|ref|XP_005109462.1| | PREDICTED: uncharacterized protein LOC101845043 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1134.1_14807.t1 | gi|196008521|ref|XP_002114126.1| | hypothetical protein TRIADDRAFT_58269 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_1134.1_14807.t1 | gi|196008213|ref|XP_002113972.1| | hypothetical protein TRIADDRAFT_57945 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1134.1_14807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1134.1_14807.t1 atgagtgatccaaataggccattttcagggaaatcaaaacctctcccaccaatagcaaaatcttcgaatgataataagag cgcatcatcaaatcagcaagaaaatggccctacggaccagactgtatcgggcaatggatctgttccaccgccaccagctc caccaccagatgccccaccactacctggactgccaccaccagcggcaccaccagtgccaccaccaccgccaccaacaata gcttcaggagatcagaataatgatacatcagtactaaatgaagcgcttaatgtacctgtagaggcatcagctaaaaaggg aaaatcaaaagcaaagaaaggcgggatcagattcatgaatgaggtgacagacatatacacaggaataaaggaacagatac tcagtgaagatgtgagtgttaaagatatgagggaaaatccttacactaacttactccctgatgtctcacagaagtctgta tacaaaacagccaaagtcaagacagttaaaagggaacggccgaatgcttcattaccaaaattgcaatttggaatcaatga tttactggaaaagaaatcacagcttcgaaacattcaaaaagagtacaaaaaagtacaattaaacagagaggatgtatttg ataaacacaaggagtatgaccactttcccttgatgtcagtttatcatgacctgaaggagcaggttttgacattaagtggt cgtcttacctccctcaatctcagtggagtggaacaactcacagacatgttctttgctgtacttatagccaaacagctgga attcaagcatttatctaatctcaacttgacaggatgctcaaatctgacagatatgggaatgtattgggtgactaaacata tgcctagtattgggagtgtatatttgcgtggatgttcaaacatcacagagagaagcattcagtattttctggatgggaaa caagtcattaaagattttaatgctcaaggggcaaatataaggttgatttcaccaaaattagctgtcaacttgtatggtgg gatgggaaagcgtgatcattctcaaactcacctagatgtcttcaagattacgttgttaagacatgacccaagtctgccta gcttgggtgatgaagtactccctccgtctaactcaaaaggtctacgcaagtggtcaaactggaaacctctacctgatagt acagcagaattcaatgtctatgaagtggacgtgggaagtattacgttgttaagacatgacccaagtctgcctagcttggg tgatgaagtactccctccgtctaactcaaaaggtctacgcaagtggtcaaactggaaacctctacctgatagtacagcag aattcaatgtctatgaagtggacgtgggaagtggctttgagaatttagtcctaagcaatggaagtgtggttgtcgtccca tacacagacaataaggatcagagtgaagtgctcaggctagcagagaccattatgtcagtactagtacagtatccagaaaa tgtgtttatgttggccaacgtctccagtgaccatgattccaaaaactacctatcacctgcacacaaaagacacctagtca aagatgtactggaggtctacaggaaatctctacaggagaagctggaatttgtaactgagcggtcactctggtacatgaat gaacataagtaccatgaacagatacagtacactgctgccagaaggacattgttataccttgacaaactactagaggaaaa tagttctttactcatgactgtccatttccaaaatgagaagcagagtggctttgggggtattacagaggcagtggacactc tacaggagaagtacccatggcacgactttggtgtctaccctgagacaaaaaacgctataaaacttgcgcacaggaaggaa gaattccctgcaggatttgggtcactcacaactttccttgccgctatgttggatgatactaaaatgaatctcaacatcag atcatcatatagggaaatgtaccaggtcttcagccttatgtcagagaggggaaaatgtagtttctttcctggagagagag aaaacttatgtattgtaaatgaagaaatgttggagaaactatgtaatggactgacagagagaaaacctgagaagaagatg tttgttagtggtataggaggcgacgtactcggctacagtcagtctgatctgaccgacattatcatctcttctgccatgcc atcagaaatgacacaaaagctatcagagaaacaaatatttatgatgctttcaacattagaaaatatgggaattattctaa agatgccctgccagtaccttacaaaagattcttttgcagaaaatagttttggctacgtattgtcgagggatctccctgaa aaaagcacatttgtagatgaattctggccaccagacatacctggggatgaactacaaacacagaagatatatgtcttgcc ggcatttccagtgtcactgttacactgtctctacagtgaatacagtggactttattcattctcgttactatggaaaactg gattcatagttcagattggccctgttacattgttgttggaacttctgtacaaaagttcaggagcagggtataataatcca ggacaaccagctattgtagtagcaagtagagtccagcaaccagctactgtcatcaaagccagtcatgaagttaaaaagtc tgccgctactgaaagattgacagaaattatgtggaacgcactcaaacaactaacggtcatccttaatgcctttctacaga aaagacaaatatttgctgcaaaaacattagcatgtcagaactgttgtccgacacaaaatcgttatgagattatgaaaact gacaatatttgtgaatatgatgaaatcagaatcaaagctagtcacgacagagggcttcgctgtaggagagagcagcaaaa ggaccagtttgatattgtggcctatttgggttcagagcaagtgagacatggcacagacttcatccctaaccatgcgatct atgacaaagattatgagaaacagattgtggacagtagtagctcctctagcccatggccaacacggtgcttcatgtgttct aactgtgctctggagggaatcaattgttatggcaatatggacaatgggaaaactaccaaacattgcggctgtttgttacc aggcttcctgtgtccattttgtggcatatgcaagagatgtgttaggcagcttacacttgctcacagtgttacacatccaa cttttcaatcaaaagaatttacctcagcttcggagattaaaaatggctacataatacaaacaggcagcttgatcagcttc gctgtgagtgcacacccttacaaagtcaacatgccgatgacactggaaaacttcagccactttcaggttgttctgactcg ggggatttggtttacactacaaatcactgttgataagcaggagatatactttaattttggtgagggaacgttataccaag aagttggtgacaagaagaactctttagatacagaacttgatgtcctcaggccacttaagatgggagattttgttgatgtg tacctcagaccagaaaatgaactgggtgatcaatgtttggagattcaaaccaacctagctgtgttgtatagaagacagat tttgaatccttcagtcaatgtcagtgtaaatgctaataagccaggcaacgttacactcggatcaactcatctcagggatg tgcagaccagtctgggactcaaaatggatcttggtgagtcagcatcagtggacctcttcattctgaaagggaagaatctc atggatcaagatgtgtacggttcaaacttcaatggcttccacccttttgtgagagtgaaagtaggagggaaggttgtgta tgagactaactggagaacaggaagtcaagttaaatggaacgaacatgttttattccaaatgtctgaggacgcacaggaag tagaaatagttttatacaacaaagagagcatggcagaggaattgataggaataatcatgtacaacctagaacatttaaga gaactgtcagagggtaatgagagacagtgggtgccagtgcctcttactaaaaatgcttccatccaaatcaaggctattgt caaataccttgataaacagggcttagaaaagaaagatgagatggtacaaggacatagtagaaatacattaatcaggcgtt gtgcaggctggttaccaacaaccattgagcagacactgtttcagttctccatggacttcaagtcactctttgaaaataga ttcctagatttagctggatcagctgtcatgatttcaccaagggaactaccagagagcagaatactactgccatcttatca gcatataaaagcagacctactagctcatcctttgtgcatgactagaactgagattttagaggagagcagcaaagacgtac agcagggatggcattaccatctgacgaatgctagaggttacgatctgattgattacaaggcatccatagcctggtcatgg caagtcttactgatgcatagacacaagatcacattgcctccttatgacaagctatttcctaatatcagccaggatttcaa tgaggatctgatatctagagggttacatcagtacctgaagtacttatcaatccacctgttcttagcgagagatgatgata cccccagtgggtttccactacaactaatgttcctacagaacctacgttaccttaacctgacgtaccaaggaattgtacac gtaccggatgagataggtctacttaccagcctggagcacctgattctcagttataaccctaacctactgtctgtgtcagc taaagtgggagatctacctttattaactctagaattagaagaatgtcccctactaaagacaccaccaaaggagatccgag agagaggcttcgctacaacgtacgcttatctccgtagactacttagtgggtcagtggaatgtaaaaggacaaaacttatg cttgttggtcttggtgaggctggaaagacaagtttggcacgagcaatgagacaggagggagatctgaagaactcactgac aggagtagaagatatcactgatggaattgacatttccaagtggatagtgaaacatgaaggagatgaaatatcatacagtg tatgggactttgctggacagactgtatactacaacacacaccagttctttttgtcgaacagagctgtatatctattggta tggaatgtgcgtctgggccatgagcatgcaggacttaaattctggctcagctcaattagggtccatgcacccaaagcacc tatatttattgtgggcacacatgttgatcaggtcagtaaagtagaacttccgacggaggaattaaaagaacagtttaacc agatagaggggttcttctatgtcagttcttactcaggccagggaataccagaactaaagcagaagctgttctctgtgact ctacaacaggagtatatgggtgagaggattccttctgcttggctggaactggagaaaattattgtcaggcagaggaacca attacatgttgacacaataagctttgagaatgtggtcaacctggccggagaggccggtatagtggacagaacagaggtca gtcaggccgtacagttcctacatgaccttggggcactacaacacttcagttctaacgtgtatctcaagtcgcacatcgtt atcaatccacagtggattgtggatgttatggcatgtgttgtatcagtgaaacagtcagcaattaaggagggaaggctcaa tcaccgggatcttggtgagatctggtcaagctacaaagatgacatgtaccagtggatgttacgactgacggaggagtttg acttaacataccctgtacccggtgaagatctggaaaagatcaacatagtaccatgcctgctaccagagacaaaaacggag ttcacttggccagaaattcacaagaatgatgacatatatgagaccaagatggtgtacacgtttgactatctacctgcagg acttttcaacagaggacaggtaaggctccaggagtattctgacagcgtcatcatatggaagactggatcttttctcagga agaatggacatatagcactcctacagcagtacaaggacacagagatgatagtgaaggtacagggccctataccagagaac attctattccatgtgcatgaggtatttgaggggctcatcctggagtcctatcagggagtacactacgacttcaccatacc atgtcctgattgccttaaacagaatctgaaagatccccatatgtttcctgcttctatcataagacgtgctatagaactca aggcaccattcttacagtctgtcacaccaccctcaagcaacaatgattttgatgtccatctgcagaaagcagttagtgga ttgcaggatctccgacggaccatgaagatagccgtcacaccaccctcaagcaacaatgattttgatgtccatctgcagaa agcagttagtggattgcaggatctccgacggaccatgaagatagacacatgtacattgttctatctactgtccaagtttt tgtctaatgccttgattttcactcgttttgaactgcatcagtttgtaatattttgcttggactcagatatctacaatact aattag |
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Protein
| Protein ID | pfu_aug2.0_1134.1_14807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1134.1_14807.t1 MSDPNRPFSGKSKPLPPIAKSSNDNKSASSNQQENGPTDQTVSGNGSVPPPPAPPPDAPPLPGLPPPAAPPVPPPPPPTI ASGDQNNDTSVLNEALNVPVEASAKKGKSKAKKGGIRFMNEVTDIYTGIKEQILSEDVSVKDMRENPYTNLLPDVSQKSV YKTAKVKTVKRERPNASLPKLQFGINDLLEKKSQLRNIQKEYKKVQLNREDVFDKHKEYDHFPLMSVYHDLKEQVLTLSG RLTSLNLSGVEQLTDMFFAVLIAKQLEFKHLSNLNLTGCSNLTDMGMYWVTKHMPSIGSVYLRGCSNITERSIQYFLDGK QVIKDFNAQGANIRLISPKLAVNLYGGMGKRDHSQTHLDVFKITLLRHDPSLPSLGDEVLPPSNSKGLRKWSNWKPLPDS TAEFNVYEVDVGSITLLRHDPSLPSLGDEVLPPSNSKGLRKWSNWKPLPDSTAEFNVYEVDVGSGFENLVLSNGSVVVVP YTDNKDQSEVLRLAETIMSVLVQYPENVFMLANVSSDHDSKNYLSPAHKRHLVKDVLEVYRKSLQEKLEFVTERSLWYMN EHKYHEQIQYTAARRTLLYLDKLLEENSSLLMTVHFQNEKQSGFGGITEAVDTLQEKYPWHDFGVYPETKNAIKLAHRKE EFPAGFGSLTTFLAAMLDDTKMNLNIRSSYREMYQVFSLMSERGKCSFFPGERENLCIVNEEMLEKLCNGLTERKPEKKM FVSGIGGDVLGYSQSDLTDIIISSAMPSEMTQKLSEKQIFMMLSTLENMGIILKMPCQYLTKDSFAENSFGYVLSRDLPE KSTFVDEFWPPDIPGDELQTQKIYVLPAFPVSLLHCLYSEYSGLYSFSLLWKTGFIVQIGPVTLLLELLYKSSGAGYNNP GQPAIVVASRVQQPATVIKASHEVKKSAATERLTEIMWNALKQLTVILNAFLQKRQIFAAKTLACQNCCPTQNRYEIMKT DNICEYDEIRIKASHDRGLRCRREQQKDQFDIVAYLGSEQVRHGTDFIPNHAIYDKDYEKQIVDSSSSSSPWPTRCFMCS NCALEGINCYGNMDNGKTTKHCGCLLPGFLCPFCGICKRCVRQLTLAHSVTHPTFQSKEFTSASEIKNGYIIQTGSLISF AVSAHPYKVNMPMTLENFSHFQVVLTRGIWFTLQITVDKQEIYFNFGEGTLYQEVGDKKNSLDTELDVLRPLKMGDFVDV YLRPENELGDQCLEIQTNLAVLYRRQILNPSVNVSVNANKPGNVTLGSTHLRDVQTSLGLKMDLGESASVDLFILKGKNL MDQDVYGSNFNGFHPFVRVKVGGKVVYETNWRTGSQVKWNEHVLFQMSEDAQEVEIVLYNKESMAEELIGIIMYNLEHLR ELSEGNERQWVPVPLTKNASIQIKAIVKYLDKQGLEKKDEMVQGHSRNTLIRRCAGWLPTTIEQTLFQFSMDFKSLFENR FLDLAGSAVMISPRELPESRILLPSYQHIKADLLAHPLCMTRTEILEESSKDVQQGWHYHLTNARGYDLIDYKASIAWSW QVLLMHRHKITLPPYDKLFPNISQDFNEDLISRGLHQYLKYLSIHLFLARDDDTPSGFPLQLMFLQNLRYLNLTYQGIVH VPDEIGLLTSLEHLILSYNPNLLSVSAKVGDLPLLTLELEECPLLKTPPKEIRERGFATTYAYLRRLLSGSVECKRTKLM LVGLGEAGKTSLARAMRQEGDLKNSLTGVEDITDGIDISKWIVKHEGDEISYSVWDFAGQTVYYNTHQFFLSNRAVYLLV WNVRLGHEHAGLKFWLSSIRVHAPKAPIFIVGTHVDQVSKVELPTEELKEQFNQIEGFFYVSSYSGQGIPELKQKLFSVT LQQEYMGERIPSAWLELEKIIVRQRNQLHVDTISFENVVNLAGEAGIVDRTEVSQAVQFLHDLGALQHFSSNVYLKSHIV INPQWIVDVMACVVSVKQSAIKEGRLNHRDLGEIWSSYKDDMYQWMLRLTEEFDLTYPVPGEDLEKINIVPCLLPETKTE FTWPEIHKNDDIYETKMVYTFDYLPAGLFNRGQVRLQEYSDSVIIWKTGSFLRKNGHIALLQQYKDTEMIVKVQGPIPEN ILFHVHEVFEGLILESYQGVHYDFTIPCPDCLKQNLKDPHMFPASIIRRAIELKAPFLQSVTPPSSNNDFDVHLQKAVSG LQDLRRTMKIAVTPPSSNNDFDVHLQKAVSGLQDLRRTMKIDTCTLFYLLSKFLSNALIFTRFELHQFVIFCLDSDIYNT N |
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