Gene
| Gene Model ID | pfu_aug2.0_1134.1_14809 |
|---|---|
| Locus | scaffold1134.1 : 65656 ... 83267 : + |
| To GenomeBrowser | scaffold1134.1:65656..83267 |
| Genes list of scaffold | scaffold1134.1 |
| Synonym | pfu_aug1.0_8611.1_60469 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1134.1_14809.t1 | 4 | 1 | TIR_2 | 11 | 104 | 2.5e-15 | 56.4 | 8.0e-09 | 6.0e-05 | 23.1 |
| pfu_aug2.0_1134.1_14809.t1 | 4 | 2 | TIR_2 | 163 | 184 | 2.5e-15 | 56.4 | 0.0069 | 51.0 | 4.0 |
| pfu_aug2.0_1134.1_14809.t1 | 4 | 3 | TIR_2 | 193 | 228 | 2.5e-15 | 56.4 | 0.00022 | 1.6 | 8.9 |
| pfu_aug2.0_1134.1_14809.t1 | 4 | 4 | TIR_2 | 270 | 308 | 2.5e-15 | 56.4 | 3.4e-06 | 0.025 | 14.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1134.1_14809.t1 | gi|260822187|ref|XP_002606484.1| | hypothetical protein BRAFLDRAFT_126447 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1134.1_14809.t1 | gi|676443820|ref|XP_009050229.1| | hypothetical protein LOTGIDRAFT_173949 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1134.1_14809.t1 | gi|167533475|ref|XP_001748417.1| | hypothetical protein [Monosiga brevicollis MX1] | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_1134.1_14809.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1134.1_14809.t1 atggtaagtgatagggctttcatatatctgtttatatcatattgtgatgtggatgcaccagatgacaggtcagaggtcat tcaccctgccactgttcatgaggatcttatcaatgcaggatatacatgctggtttcctgaggtgaccaacaagtactcca cagatttgatggcacgggccctgatggattctaccatatttgtggttttcatgtcgaccagctacgccaatgatccaacg tgtgctgacatatttaagtatgccaagctgaccctcggcaagccaatggtagtgatagtagtaggggaggaaaacttcag ctggaggaagacaaacttaggattgctccttcctgatgtgtcctttgttaacatgatcaactctaagaagcaaatgtatg atgggaaattcagagagctattacagaagctagacgagttgatgaacctagccaccagaaacgtatctacggagagtccg gagtgcttcataagttactgctggaaaaactctgctcaagccgtcgctctgggaacaagggcagaggataaatcactggg gtacggagatcctagagaaatcaagaactacctagaggaggagggtgtccgatgctggatagatgtagaaaggataggaa tgaatggtttatttgatgagatagccaagggtctactggaggccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnaaaatggtcgtggcgtgtgtatcagacgagtatgtccagtccccgagctgtaagaaggagttccattatg catgcactgtactgaacatccccatagttctatgtgtggtgggaacaggcagtgaatggagaagaactgaaaaaactact gaagaggaagtcaaaaacgaacaacagtttcaggaactatatgagcttgcacaacgtaagttcttgaggcagatcgtcaa ctatgcctcttcccacgatgtggaaccatatcctaggatctttatggtggacttggttaaacaagaaaatcaaagtacaa cgcaagaagacccggaacaagaaaaacaagatcctgagaaattaaaagccagtatatctatggaggataagagtgatgca ttcagacttagacaatactgtgtctacatactgtgtgaatgtgataagggatggcatacagtagatgagccaatgatgtt accagaagacttcggcagtgatctattggaccagtttgctccatatttgtgccgagtgacggccataatgaagcacagta aaactatggttcccaacttcctcagcgatcctgatggtcaacaatacacaaagtggctgtttgagtccactgctgccgta gtaccagactttaagacaggctatcatcaattcagggaacttgttatgaatctggacattcataataaagcagggaaact ctcaagatgtcgtcaaaccagcggcaagacaatatggctgtgttcacagcatgtgtcggagatgaaggtcaccgtcctcg gtaaagacacagcacccattaaacagaaagctagcgtacaaacggcaattaactatacagaggaatggctgagaaaacta gatcctaaaagactccaggccaagtttaaatcatcgaaaaaggccgacagaaaacctgttgtttatgatctgcctggtac taggaaagcagctccatcttcctctgtcagaactaagaaggacgtgttagaggaaatagctctaaccaaaggtacgacag ctggagaggtagctaaaaagacggctttactcgccgagttgtcgtctgctactgggacggcccctcatagaattacatca aaattgtcaaaacttgagagggaaggcagtgccacctcaagaacgagccagaaaacaacaaaaagtgggcagacaactcc taaactaaaacgccccacaagtcaggcgtgtattgtcatgtag |
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Protein
| Protein ID | pfu_aug2.0_1134.1_14809.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1134.1_14809.t1 MVSDRAFIYLFISYCDVDAPDDRSEVIHPATVHEDLINAGYTCWFPEVTNKYSTDLMARALMDSTIFVVFMSTSYANDPT CADIFKYAKLTLGKPMVVIVVGEENFSWRKTNLGLLLPDVSFVNMINSKKQMYDGKFRELLQKLDELMNLATRNVSTESP ECFISYCWKNSAQAVALGTRAEDKSLGYGDPREIKNYLEEEGVRCWIDVERIGMNGLFDEIAKGLLEAXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMVVACVSDEYVQSPSCKKEFHYACTVLNIPIVLCVVGTGSEWRRTEKTT EEEVKNEQQFQELYELAQRKFLRQIVNYASSHDVEPYPRIFMVDLVKQENQSTTQEDPEQEKQDPEKLKASISMEDKSDA FRLRQYCVYILCECDKGWHTVDEPMMLPEDFGSDLLDQFAPYLCRVTAIMKHSKTMVPNFLSDPDGQQYTKWLFESTAAV VPDFKTGYHQFRELVMNLDIHNKAGKLSRCRQTSGKTIWLCSQHVSEMKVTVLGKDTAPIKQKASVQTAINYTEEWLRKL DPKRLQAKFKSSKKADRKPVVYDLPGTRKAAPSSSVRTKKDVLEEIALTKGTTAGEVAKKTALLAELSSATGTAPHRITS KLSKLEREGSATSRTSQKTTKSGQTTPKLKRPTSQACIVM |
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