Gene
| Gene Model ID | pfu_aug2.0_1134.1_14810 |
|---|---|
| Locus | scaffold1134.1 : 84375 ... 91835 : - |
| To GenomeBrowser | scaffold1134.1:84375..91835 |
| Genes list of scaffold | scaffold1134.1 |
| Synonym | pfu_aug1.0_8611.1_60468 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| endonuclease 8-like 1 | GO:0005488 GO:0006259 GO:0006950 GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1134.1_14810.t1 | 2 | 1 | Fapy_DNA_glyco | 2 | 129 | 8.3e-10 | 39.0 | 7.0e-13 | 5.2e-09 | 36.4 |
| pfu_aug2.0_1134.1_14810.t1 | 2 | 1 | H2TH | 154 | 203 | 4.2e-09 | 36.0 | 1.8e-12 | 1.4e-08 | 34.4 |
| pfu_aug2.0_1134.1_14810.t1 | 2 | 2 | H2TH | 314 | 324 | 4.2e-09 | 36.0 | 1.0 | 7800.0 | -3.3 |
| pfu_aug2.0_1134.1_14810.t1 | 2 | 2 | Fapy_DNA_glyco | 376 | 400 | 8.3e-10 | 39.0 | 0.24 | 1800.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1134.1_14810.t1 | gi|432861662|ref|XP_004069676.1| | PREDICTED: endonuclease 8-like 1 isoform X1 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_1134.1_14810.t1 | gi|632939105|ref|XP_007907676.1| | PREDICTED: endonuclease 8-like 1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1134.1_14810.t1 | gi|551492585|ref|XP_005797862.1| | PREDICTED: endonuclease 8-like 1-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_1134.1_14810.t1 | gi|564252976|ref|XP_006265499.1| | PREDICTED: endonuclease 8-like 1 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_1134.1_14810.t1 | gi|557293320|ref|XP_006029142.1| | PREDICTED: endonuclease 8-like 1 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1134.1_14810.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1134.1_14810.t1 atgccagaaggtccagagctgcatctgtcaagcaaattcgtaaatattgtatgcaaaggtagaattttctccggtaagat agtaaaatctgatgtcagcaagcatgcaaatgttgaatgggacggaaatgactacaggattgccgcaacatccagaggga aggaactgaaactgacacttactgaggtcaatggtgatgaaacagacaataaatataaaaatccgaggaaatgtcttgat attctttttaattttggtatgtcaggtaaattcgatttttaccaggctgatcaactgaagaaacatgcacacttgaactt tttcaccaaagatgagccaaggatggtgttgagtttcgttgattaccgtagatttggaaagtggcaagttagggctgatt ggtcaaaggatagaggaccttgcatattatttgagtatcagaaatttagggaaaatgttttaaacaatttgagtgattct gcattcaacaaaccaatttgtgaggttctccttaaccaaaagttcttcaatggcctgggaaattacctgagagcagaaat cttatacagagcaggaattcctccctttgtatctgccaggtcagtgttggagcctttgttagatgatggaagtacagatg ttaagatcaagagggaagctcctgacattctccaactttgtaatatattaccactagaagtagtcaaccttgctacatat gtggctgatgagtacgaagtaaaaccgttttcaagtttccagatagcggatttggcctattttattgatataataacctc aaggtaccatggtaacccaggacctatggtacctaaagaaaccaaagtacgaggaataaagagaagttcaaaagttgcaa agaacaaagattctaagaaattgaaaagtgaagactctgaagatcaagaatatacagaaaagaaatcaaagaagataaca aggaaagtactcaaagaagctgtagatgctaatggtgaagatactggtgctaagaaaacaacaaagagaagtaaaaagcc cgcaagtgacacggctaaagtatcaaaaattgctctgaaacatttaaagtctacaccaaaacagaacaaaacaaggaaga gagtcggttcatctgtgggacttgatacaccttacactgtgaatggcaaaaacatttctagcagaggtaaaagaggaaag cggaagagcgaaagcaaactgaaaaatagcgtagagaaatcaagaaagaagaaaacagatgttgaaatgaatgggaagtt aaatgataggccaaaatcacaaagagtaacaagaagctctgcaaaatag |
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Protein
| Protein ID | pfu_aug2.0_1134.1_14810.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1134.1_14810.t1 MPEGPELHLSSKFVNIVCKGRIFSGKIVKSDVSKHANVEWDGNDYRIAATSRGKELKLTLTEVNGDETDNKYKNPRKCLD ILFNFGMSGKFDFYQADQLKKHAHLNFFTKDEPRMVLSFVDYRRFGKWQVRADWSKDRGPCILFEYQKFRENVLNNLSDS AFNKPICEVLLNQKFFNGLGNYLRAEILYRAGIPPFVSARSVLEPLLDDGSTDVKIKREAPDILQLCNILPLEVVNLATY VADEYEVKPFSSFQIADLAYFIDIITSRYHGNPGPMVPKETKVRGIKRSSKVAKNKDSKKLKSEDSEDQEYTEKKSKKIT RKVLKEAVDANGEDTGAKKTTKRSKKPASDTAKVSKIALKHLKSTPKQNKTRKRVGSSVGLDTPYTVNGKNISSRGKRGK RKSESKLKNSVEKSRKKKTDVEMNGKLNDRPKSQRVTRSSAK |
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