Gene
| Gene Model ID | pfu_aug2.0_1137.1_24712 |
|---|---|
| Locus | scaffold1137.1 : 120336 ... 127690 : + |
| To GenomeBrowser | scaffold1137.1:120336..127690 |
| Genes list of scaffold | scaffold1137.1 |
| Synonym | pfu_aug1.0_2408.1_15802 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-cell leukemia homeobox protein 3-like | GO:0005634 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1137.1_24712.t1 | 2 | 1 | Homeobox | 18 | 27 | 7.9e-21 | 73.4 | 3.0 | 8800.0 | -3.6 |
| pfu_aug2.0_1137.1_24712.t1 | 2 | 2 | Homeobox | 159 | 215 | 7.9e-21 | 73.4 | 2.7e-24 | 7.9e-21 | 73.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1137.1_24712.t1 | gi|742199291|ref|XP_010892954.1| | PREDICTED: T-cell leukemia homeobox protein 3-like [Esox lucius] | 0.0 |
| pfu_aug2.0_1137.1_24712.t1 | gi|148233906|ref|NP_001079215.1| | T-cell leukemia homeobox 3 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_1137.1_24712.t1 | gi|530580491|ref|XP_005284141.1| | PREDICTED: T-cell leukemia homeobox protein 3 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1137.1_24712.t1 | gi|147900079|ref|NP_001079216.1| | T-cell leukemia homeobox 1 [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1137.1_24712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1137.1_24712.t1 atgtctgacgtcgaggagactgagggcgacaaaaaagacgttcgaaatgagcagttgaggacaaaatttgaaatgaatag agaaaaacctaaattatcatttggaatgagcagaattctagacaaaagtgacgacgatgacgatgaggatgaatctgata tagaaataaacgttcaagacgatgacatagaggctaaaagtgaaaaatcagccaatatttcaaaagagtcttctgataaa agcctttctcgacaatgtgttagtgtaccccagaattatcctacgggtctgtcaaccccgtttggactttgtagtttacc ttcacactttgctgttcctgttcatagaccacaccctattttgccaatgctgacgtcatattctttgccggggtggatcg acctgcgtagagacagatttggagttgctcggagaattggacacccataccagaacagaacgccaccgaaacgtaaaaaa ccacgcacgtcattctcacgtttacaaataatggaactcgagaagaggtttcaccgacagaaatatctggcatcagcgga gaggtccgccctggcaaaagcgctgaaaatgaccgacgctcaggtcaaaacttggtttcaaaataggaggacaaaatgga ggcgtcagactgcagaggaacgggaggctgaacgccaagccgccaatcgtctcatgctaagccttcaaaacgaggctcac aaaacaatttatgacatccgggaccctctgtgtatgagcaactcttccttgcatgcactgcaaaatctacaaccatgggc agacgacaactcggacgatcaacagtga |
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Protein
| Protein ID | pfu_aug2.0_1137.1_24712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1137.1_24712.t1 MSDVEETEGDKKDVRNEQLRTKFEMNREKPKLSFGMSRILDKSDDDDDEDESDIEINVQDDDIEAKSEKSANISKESSDK SLSRQCVSVPQNYPTGLSTPFGLCSLPSHFAVPVHRPHPILPMLTSYSLPGWIDLRRDRFGVARRIGHPYQNRTPPKRKK PRTSFSRLQIMELEKRFHRQKYLASAERSALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQNEAH KTIYDIRDPLCMSNSSLHALQNLQPWADDNSDDQQ |
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