Gene
| Gene Model ID | pfu_aug2.0_1140.1_01408 |
|---|---|
| Locus | scaffold1140.1 : 29236 ... 33274 : + |
| To GenomeBrowser | scaffold1140.1:29236..33274 |
| Genes list of scaffold | scaffold1140.1 |
| Synonym | pfu_aug1.0_10259.1_68161 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1140.1_01408.t1 | 3 | 1 | PAP2_C | 18 | 18 | 5.4e-24 | 84.2 | 1.7 | 8500.0 | -2.9 |
| pfu_aug2.0_1140.1_01408.t1 | 3 | 2 | PAP2_C | 61 | 77 | 5.4e-24 | 84.2 | 0.18 | 890.0 | 0.2 |
| pfu_aug2.0_1140.1_01408.t1 | 3 | 3 | PAP2_C | 146 | 218 | 5.4e-24 | 84.2 | 1.1e-27 | 5.4e-24 | 84.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1140.1_01408.t1 | gi|291235229|ref|XP_002737548.1| | PREDICTED: sphingomyelin synthase-related protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1140.1_01408.t1 | gi|675869974|ref|XP_009020547.1| | hypothetical protein HELRODRAFT_100598 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1140.1_01408.t1 | gi|524887173|ref|XP_005100175.1| | PREDICTED: sphingomyelin synthase-related protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1140.1_01408.t1 | gi|72009233|ref|XP_783607.1| | 0.0 | |
| pfu_aug2.0_1140.1_01408.t1 | gi|736196548|ref|XP_010772934.1| | PREDICTED: sphingomyelin synthase-related protein 1-like [Notothenia coriiceps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1140.1_01408.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1140.1_01408.t1 atggaggctgtaaagctggtagtgagtttgctgtacgtggtatttgcccagctttttatgtgttttacggccattgtagt aacggatcgtctaccaaacaggactaagtaccagcccctccccgatgtggtgctggacaataccccctatatcccctggg ggtcggacacggcagagatatgtctagttacacttaacttcatggctataatgatggctgtatttcacaaagaacggagt ttattattaaggagattctctgtacttgctgggaatttagcctttctgagaagtgcctgtatctttgtaacatcggcgcc tgtggcggacgtcaatgaaatttgcatagtgaagccagaagattcttttggatatcgcctactaagggcgtgtcgggtgc ttgtacgtatgggctatacatccatgggctcggcccagtgtggggattatatattcagtggccacaccatgattatgacg ctgtgtaacttgtttcttaatgaatacacgcataaaagaatgcacgttatccgaattttaggatggatacttaattttgc gggtatgttatttcttatactaggtagaagccattatactgtagacgttattttaggattttatataacggttgccatga caaacaattaccatctaatggctcgcagtgaaagcgttctgtctaagcgtaaaatttaccactatttgatatttcccttg atgactctatttgttgctgacaatcaggaatgcagagtgaaagacaagaaagtgcagaacaattttgatattttcacaaa tcacaaggagaagaaatgcgacgagaagattttagtgtgctag |
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Protein
| Protein ID | pfu_aug2.0_1140.1_01408.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1140.1_01408.t1 MEAVKLVVSLLYVVFAQLFMCFTAIVVTDRLPNRTKYQPLPDVVLDNTPYIPWGSDTAEICLVTLNFMAIMMAVFHKERS LLLRRFSVLAGNLAFLRSACIFVTSAPVADVNEICIVKPEDSFGYRLLRACRVLVRMGYTSMGSAQCGDYIFSGHTMIMT LCNLFLNEYTHKRMHVIRILGWILNFAGMLFLILGRSHYTVDVILGFYITVAMTNNYHLMARSESVLSKRKIYHYLIFPL MTLFVADNQECRVKDKKVQNNFDIFTNHKEKKCDEKILVC |
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