Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1140.1_01415
Locus scaffold1140.1 : 102792 ... 105235 : -
To GenomeBrowser scaffold1140.1:102792..105235
Genes list of scaffold scaffold1140.1
Synonym pfu_aug1.0_17371.1_39938

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1140.1_01415.t1 gi|198456739|ref|XP_001360425.2| GA21819 [Drosophila pseudoobscura pseudoobscura] 3.0e-06
pfu_aug2.0_1140.1_01415.t1 gi|752878623|ref|XP_011256805.1| PREDICTED: neurofilament heavy polypeptide [Camponotus floridanus] 4.0e-06
pfu_aug2.0_1140.1_01415.t1 gi|585694702|ref|XP_006895633.1| PREDICTED: glycogenin-1 [Elephantulus edwardii] 4.0e-06
pfu_aug2.0_1140.1_01415.t1 gi|529427944|ref|XP_005233798.1| PREDICTED: glycogenin-1 [Falco peregrinus] 5.0e-06
pfu_aug2.0_1140.1_01415.t1 gi|195121384|ref|XP_002005200.1| GI20361 [Drosophila mojavensis] 7.0e-06

Transcript
Transcript IDpfu_aug2.0_1140.1_01415.t1
Definition-
>pfu_aug2.0_1140.1_01415.t1
atgaaaaatggattacataaaggagataaagggacaaagattgaagagacagtgaaagaaaaagaaaatttcatgtcata
caaactgacagagctgcaggatagggaggtttcgttgactgtaacgagctatgacgtgaaacccacggtggcgccatctg
tgacgccatctagcggaaaaatgacggaatcagaagccaggagaagagcatgggaaaatggacaagttgactatctcgga
gtcgatagctttgataacatcatgaggaaactgaacgagagtatggactgcagtccttcctataacgtacatatgccact
gtag

Protein
Protein IDpfu_aug2.0_1140.1_01415.t1
Definition-
>pfu_aug2.0_1140.1_01415.t1
MKNGLHKGDKGTKIEETVKEKENFMSYKLTELQDREVSLTVTSYDVKPTVAPSVTPSSGKMTESEARRRAWENGQVDYLG
VDSFDNIMRKLNESMDCSPSYNVHMPL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495