Gene
| Gene Model ID | pfu_aug2.0_1140.1_01419 |
|---|---|
| Locus | scaffold1140.1 : 139705 ... 163425 : - |
| To GenomeBrowser | scaffold1140.1:139705..163425 |
| Genes list of scaffold | scaffold1140.1 |
| Synonym | pfu_aug1.0_5765.1_45293 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| v-type proton atpase 21 kda proteolipid subunit | GO:0015078 GO:0015991 GO:0016021 GO:0016491 GO:0033179 GO:0046872 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1140.1_01419.t1 | 5 | 1 | ATP-synt_C | 31 | 39 | 0.0 | 155.8 | 1.8 | 6600.0 | -2.9 |
| pfu_aug2.0_1140.1_01419.t1 | 5 | 2 | ATP-synt_C | 65 | 126 | 0.0 | 155.8 | 2.7e-18 | 1.0e-14 | 54.1 |
| pfu_aug2.0_1140.1_01419.t1 | 5 | 3 | ATP-synt_C | 153 | 212 | 0.0 | 155.8 | 1.9e-15 | 7.1e-12 | 45.0 |
| pfu_aug2.0_1140.1_01419.t1 | 5 | 4 | ATP-synt_C | 238 | 281 | 0.0 | 155.8 | 1.1e-12 | 4.1e-09 | 36.1 |
| pfu_aug2.0_1140.1_01419.t1 | 5 | 5 | ATP-synt_C | 308 | 367 | 0.0 | 155.8 | 4.3e-15 | 1.6e-11 | 43.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1140.1_01419.t1 | gi|196008965|ref|XP_002114348.1| | expressed hypothetical protein [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_1140.1_01419.t1 | gi|676426306|ref|XP_009044582.1| | hypothetical protein LOTGIDRAFT_223715 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1140.1_01419.t1 | gi|260830816|ref|XP_002610356.1| | hypothetical protein BRAFLDRAFT_114064 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1140.1_01419.t1 | gi|339240071|ref|XP_003375961.1| | vacuolar ATP synthase proteolipid subunit [Trichinella spiralis] | 0.0 |
| pfu_aug2.0_1140.1_01419.t1 | gi|657559068|ref|XP_008283482.1| | PREDICTED: V-type proton ATPase 21 kDa proteolipid subunit [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1140.1_01419.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1140.1_01419.t1 atggacatggattacaacccagagaagccttctacgaagcgctctgggatttctattttcccaatttactttatcaccct cagtgtggcaacactagccatcatagtaatcgctttttattacatgctgacaggaaagggcacaagggtagactttggat ggtttcttgaggagacttcaccatacatgtgggctggtattggaattggcttggccatctcactgtcagttgttggtgct gcatggggtattttcatcagtggatccagtatacttggtggtggagtgaaagcccccagaatcagaacaaagaatctgat cagtatcatcttctgtgaggctgtggctatatttggcatcattatggcaatcatcatcggcaacaacatcgggtcatata atccagatacggccagtgaaacaataataagggatagctacaatgcagggtaccgtatgtttgctgccggactgaccgtg ggtgtgtctaatattgcttgtggattgtgtataggtgtggttggatcaggggcagctttagccgatgcccaaaactcctc cctctttgtaaaaatcttaattatagaaatctttggcagtgccattggactatttggagttatcattggcattcttcagt ttacagtcagactcaatcctgtgatagactgtcagcttaggggaaaaccaaaactgactgctgacgacaggggtattttc atcagtggatcaagtatacttggtggtggagtgaaagccccgagaatcagaacaaagaatctgatcagcatcatcttctg tgaggctgtggctatatttggcatcattatggcaatcatcatcggtaacaacatcgggtcatataatccagatacggcca gtgaaacaataataagggatagctacaatgcagggtaccgtatgtttgctgccggactgactgtgggtgtgtctaatatt gcttgtggattgtgtataggtgtggttggatcaggggcagctttagccgacgcccaaaactcctctctctttgtaaaaat cttaattatagaaatctttggcagtgccattggactatttggagttatcattggcattcttcagattgttggagtgaaga tgggagaatag |
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Protein
| Protein ID | pfu_aug2.0_1140.1_01419.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1140.1_01419.t1 MDMDYNPEKPSTKRSGISIFPIYFITLSVATLAIIVIAFYYMLTGKGTRVDFGWFLEETSPYMWAGIGIGLAISLSVVGA AWGIFISGSSILGGGVKAPRIRTKNLISIIFCEAVAIFGIIMAIIIGNNIGSYNPDTASETIIRDSYNAGYRMFAAGLTV GVSNIACGLCIGVVGSGAALADAQNSSLFVKILIIEIFGSAIGLFGVIIGILQFTVRLNPVIDCQLRGKPKLTADDRGIF ISGSSILGGGVKAPRIRTKNLISIIFCEAVAIFGIIMAIIIGNNIGSYNPDTASETIIRDSYNAGYRMFAAGLTVGVSNI ACGLCIGVVGSGAALADAQNSSLFVKILIIEIFGSAIGLFGVIIGILQIVGVKMGE |
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