Gene
| Gene Model ID | pfu_aug2.0_1140.1_01420 |
|---|---|
| Locus | scaffold1140.1 : 172107 ... 174505 : - |
| To GenomeBrowser | scaffold1140.1:172107..174505 |
| Genes list of scaffold | scaffold1140.1 |
| Synonym | pfu_aug1.0_2161.1_08239 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1140.1_01420.t1 | 2 | 1 | 7tm_1 | 20 | 33 | 0.0 | 198.4 | 2.7 | 8000.0 | -4.4 |
| pfu_aug2.0_1140.1_01420.t1 | 2 | 1 | 7TM_GPCR_Srx | 30 | 216 | 7.4e-06 | 25.2 | 2.5e-09 | 7.4e-06 | 25.2 |
| pfu_aug2.0_1140.1_01420.t1 | 1 | 1 | 7TM_GPCR_Srsx | 31 | 332 | 1.7e-18 | 66.6 | 9.4e-22 | 2.8e-18 | 66.0 |
| pfu_aug2.0_1140.1_01420.t1 | 2 | 2 | 7tm_1 | 36 | 318 | 0.0 | 198.4 | 0.0 | 0.0 | 198.4 |
| pfu_aug2.0_1140.1_01420.t1 | 2 | 2 | 7TM_GPCR_Srx | 269 | 312 | 7.4e-06 | 25.2 | 0.1 | 310.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1140.1_01420.t1 | gi|676463734|ref|XP_009056692.1| | hypothetical protein LOTGIDRAFT_190505, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1140.1_01420.t1 | gi|292629673|ref|XP_002667517.1| | PREDICTED: histamine H3 receptor-like [Danio rerio] | 0.0 |
| pfu_aug2.0_1140.1_01420.t1 | gi|637298257|ref|XP_008108367.1| | PREDICTED: histamine H3 receptor [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_1140.1_01420.t1 | gi|557261840|ref|XP_006016468.1| | PREDICTED: histamine H3 receptor-like [Alligator sinensis] | 0.0 |
| pfu_aug2.0_1140.1_01420.t1 | gi|260819228|ref|XP_002604939.1| | hypothetical protein BRAFLDRAFT_217156 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1140.1_01420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1140.1_01420.t1 atggtccagaacacttctacagagacgggggacctggctttctcagtacccgtcgccgtggtcatcggtttctttatcgg actacttatcattatgacagttgtaggaaatttaattgtgctctttgcttttgtgtatgaaaagaaactcaggaatttca gtgactacttgattctgaatcttgccgtgtctgacgtcatcattggatcagtgtccataccgttctatgctcctcagttg ttgactgggcgttggccgtttggacatacattttgcttgatttggttggtagtggactacctcacacccgcagcatctgc tataaatatctgtgtgatcagtttggacaggtatatacaggtaggacatccgttatggtcaaggaaccaccataatcgaa atttgctgattgcattccttgcagccccctggctgattcctgctctttattttattcccgccataactctgtgggagcca accaagggtcgtgttatacctgagaaccagtgctttctgccttacaataacaatataccagttcttctgataggcgcttt tatagaatttcttgtaccgttcataacagttacaacgtttaatattttggtgtatatgaacataaagagacgcagtaagc gtttagaggcacgtgcaaatgccgcccgtctggcggttgctggtgagcaagtgacgctcgatggtccttcaaataccaac gaaacgcgtaatggacgaagtgacgccagccatacgtcaagatcgagtttcaaaaaggatagaaaagcagcacgttcatt gtttatttttgttataatctttgctgtgtgttggatgccatatgaagttctggccacggtacaaacagtgtgtggaggat gcgtcaataaacatctatttgagtttgtattttggatgctgtggttgaattctaccgtcaatccattcctttatccgctg ttacatacaaggtaccgtaaggcttttgcaaaacttctacaccttaaatctacctcagtgacgcctgccgagacgcatca ttctcaaggctcgggttcgtga |
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Protein
| Protein ID | pfu_aug2.0_1140.1_01420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1140.1_01420.t1 MVQNTSTETGDLAFSVPVAVVIGFFIGLLIIMTVVGNLIVLFAFVYEKKLRNFSDYLILNLAVSDVIIGSVSIPFYAPQL LTGRWPFGHTFCLIWLVVDYLTPAASAINICVISLDRYIQVGHPLWSRNHHNRNLLIAFLAAPWLIPALYFIPAITLWEP TKGRVIPENQCFLPYNNNIPVLLIGAFIEFLVPFITVTTFNILVYMNIKRRSKRLEARANAARLAVAGEQVTLDGPSNTN ETRNGRSDASHTSRSSFKKDRKAARSLFIFVIIFAVCWMPYEVLATVQTVCGGCVNKHLFEFVFWMLWLNSTVNPFLYPL LHTRYRKAFAKLLHLKSTSVTPAETHHSQGSGS |
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