Gene
| Gene Model ID | pfu_aug2.0_1141.1_04844 |
|---|---|
| Locus | scaffold1141.1 : 97976 ... 108173 : + |
| To GenomeBrowser | scaffold1141.1:97976..108173 |
| Genes list of scaffold | scaffold1141.1 |
| Synonym | pfu_aug1.0_48791.1_70642 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta- -galactosyltransferase 2-like | GO:0016757 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1141.1_04844.t1 | 3 | 1 | Galactosyl_T | 91 | 129 | 7.4e-30 | 103.9 | 0.34 | 5000.0 | -3.2 |
| pfu_aug2.0_1141.1_04844.t1 | 3 | 2 | Galactosyl_T | 261 | 272 | 7.4e-30 | 103.9 | 0.097 | 1400.0 | -1.4 |
| pfu_aug2.0_1141.1_04844.t1 | 3 | 3 | Galactosyl_T | 272 | 404 | 7.4e-30 | 103.9 | 5.0e-34 | 7.4e-30 | 103.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1141.1_04844.t1 | gi|241159501|ref|XP_002408577.1| | galactosyltransferase, putative [Ixodes scapularis] | 3.0e-25 |
| pfu_aug2.0_1141.1_04844.t1 | gi|301625248|ref|XP_002941819.1| | PREDICTED: beta-1,3-galactosyltransferase 2-like [Xenopus (Silurana) tropicalis] | 4.0e-25 |
| pfu_aug2.0_1141.1_04844.t1 | gi|512875477|ref|XP_002939723.2| | 1.0e-24 | |
| pfu_aug2.0_1141.1_04844.t1 | gi|558163937|ref|XP_006123497.1| | PREDICTED: UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pelodiscus sinensis] | 2.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1141.1_04844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1141.1_04844.t1 atgcgaaaaattctattcgtgacagtcgctgtgagtggaatggtttgtttgcttttttcccagactcatatcttaagaag tcaagtcactcaaaagtatactgagtcaacaactatacaaattccctcagtccaagatgatattaaacataagaaaacag gaatccctcggagagaaagacaaagaatgattcttcaagtggcaaaacagctcgtgaaacaacctgaacaaatcagtaaa acatcagcaatagatggagaaaacaacatgattcatttctacacagacaatttctcgaggctgcatcagaaaagccgata ttcaactgtacaaaaacgacaaagtagaatggaaaaacttaaagacaatttaacttattccgaaaaggttggaaatacgg aacataatgaccaaaattttaatccaaaaacgcaaacaaggaatagtgttcaatcaaggaatagtgttcaaataaggaat agtgttcaaactaagaatattgttcagacgcagcctcttgctttgcaataccgttcagttaataacggaaatcgcacatt tgcttctctgattagaatttttaatcaagaaaacagaagaattaaacagtcatcttttcttatacgacccactcaatctc tgactaagtttcatacctcttcagaacctcatgacacgtttgaattcctgataaagaatgaaaatatttgtgtcggaatg acgggtgaacgagtagtcttattagttggtgtatatgtaggcgtgaacgagaaagcattgcggaaatacgtcaggagaac atggggttctaaggcagatttcatggatacgtaccgaaatttaacattaaaatccattgcattctttcattggataggga tgtattgccgtaatgcgaagtacatacttaaaattgacagtgatatgaagatagatttaggccaattgatggcagtgtta caaacgagaaacatacctgataaattcatatgtggatacatacttccaaaagctatagtagtgcgagaaagggataataa gtggtatgtatcatatcagacgtatccaagcgagtactacccaacatattgtcacggtgcagcctatttaacaactcaaa gaatcggtagagaaatagccaaactctccgttccagaagttcctttccctattgacgacgcatacattactggtattgta cgtgaagttctaggagagagcatagaaaggacaataataacgtttgatcatcattatgacccgacagagacaaaggtgat ggagggagattttatgaaatatataatgacagttcacgttgatggtatccaagacaatcaacaattacaattaaaacacc atgtcacttaa |
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Protein
| Protein ID | pfu_aug2.0_1141.1_04844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1141.1_04844.t1 MRKILFVTVAVSGMVCLLFSQTHILRSQVTQKYTESTTIQIPSVQDDIKHKKTGIPRRERQRMILQVAKQLVKQPEQISK TSAIDGENNMIHFYTDNFSRLHQKSRYSTVQKRQSRMEKLKDNLTYSEKVGNTEHNDQNFNPKTQTRNSVQSRNSVQIRN SVQTKNIVQTQPLALQYRSVNNGNRTFASLIRIFNQENRRIKQSSFLIRPTQSLTKFHTSSEPHDTFEFLIKNENICVGM TGERVVLLVGVYVGVNEKALRKYVRRTWGSKADFMDTYRNLTLKSIAFFHWIGMYCRNAKYILKIDSDMKIDLGQLMAVL QTRNIPDKFICGYILPKAIVVRERDNKWYVSYQTYPSEYYPTYCHGAAYLTTQRIGREIAKLSVPEVPFPIDDAYITGIV REVLGESIERTIITFDHHYDPTETKVMEGDFMKYIMTVHVDGIQDNQQLQLKHHVT |
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