Gene
| Gene Model ID | pfu_aug2.0_1143.1_11462 |
|---|---|
| Locus | scaffold1143.1 : 946 ... 23111 : + |
| To GenomeBrowser | scaffold1143.1:946..23111 |
| Genes list of scaffold | scaffold1143.1 |
| Synonym | pfu_aug1.0_43433.1_12521 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pseudouridylate synthase 7 homolog isoform x2 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1143.1_11462.t4 | 1 | 1 | TruD | 131 | 524 | 0.0 | 165.2 | 0.0 | 0.0 | 162.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1143.1_11462.t4 | gi|511830156|ref|XP_004739775.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1143.1_11462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11462.t1 atgaagataaggaaaaagaggaggagggggaggagcaaggaggaggaggagatgggagggggaggaggaatgaggatatt ctttaaggaggaagatgttggcatcacagagtatattggtcatcatacaggttttcatggtgtcatcaaacaaaggtatt ctgacttcattgtgcatgaaattgctcaggatggacagattgtaaaactgacgagtttagatgtggaagacacaggtgca actgacataaaagaggaggatgaaggtgttgtatatgagggtatcctgacagaggaacaagaatacaaactggttgagtt tagtgctgatccacgggaagacagaatcattgacatatcgacatctgatgataaagaagaaagaaaaaggattcatcacc atataaagtccaagtataaaaatctggagtctgacacagtgtttgaagatgacgtaccgtttatacgtgtcgtccaacag gggaaggcacgacggaataaacatgcccagtataaaagagacttgattgactggccaaagaatcttgggaaatactgtcg atttgtgctgtacaaggaaaactttgacactggtgactgtataggaagactgtcaaagtattttcacatcaataagaaca tgtttcaacatgctggaaccaaagacaagcgagccataacctcccaagaagtgacagtctacagagtaagagcagaaagg ctccagaaggcaaatagatacttttaccgcatggcacttggtaatttcagatatgttgagcagccccttaagttgggaca actacaaggaaatagatttaccattgtgctaagaaatgtttgtggtgacatgactgaaatcaacaaggcaatgacttcat tgaaagaatctggattcatcaattattatggaatgcaaagatttggtacaacggccattcctacccatcaagttggcaga gctatacttaaaagtgattataaagaggctgcagaactgattctgaaaccaagacttggagagccagcaaatgtgtcaga aatccgcaccaagtggtgggaatccaagaactcgttagagatgattaccaagctacccagaaaatacaacatagaaagaa acttgctggaaggtctcatcaagtatggggaaactaactatgccaatgcatttcaaaag |
|
| Transcript ID | pfu_aug2.0_1143.1_11462.t2 |
| Definition | - |
>pfu_aug2.0_1143.1_11462.t2 atgaagataaggaaaaagaggaggagggggaggagcaaggaggaggaggagatgggagggggaggaggaatgaggatatt ctttaaggaggaagatgttggcatcacagagtatattggtcatcatacaggttttcatggtgtcatcaaacaaaggtatt ctgacttcattgtgcatgaaattgctcaggatggacagattgtaaaactgacgagtttagatgtggaagacacaggtgca actgacataaaagaggaggatgaaggtgttgtatatgagggtatcctgacagaggaacaagaatacaaactggttgagtt tagtgctgatccacgggaagacagaatcattgacatatcgacatctgatgataaagaagaaagaaaaaggattcatcacc atataaagtccaagtataaaaatctggagtctgacacagtgtttgaagatgacgtaccgtttatacgtgtcgtccaacag gggaaggcacgacggaataaacatgcccagtataaaagagacttgattgactggccaaagaatcttgggaaatactgtcg atttgtgctgtacaaggaaaactttgacactggtgactgtataggaagactgtcaaagtattttcacatcaataagaaca tgtttcaacatgctggaaccaaagacaagcgagccataacctcccaagaagtgacagtctacagagtaagagcagaaagg ctccagaaggcaaatagatacttttaccgcatggcacttggtaatttcagatatgttgagcagccccttaagttgggaca actacaaggaaatagatttaccattgtgctaagaaatgtttgtggtgacatgactgaaatcaacaaggcaatgacttcat tgaaagaatctggattcatcaattattatggaatgcaaagatttggtacaacggccattcctacccatcaagttggcaga gctatacttaaaagtgattataaagaggctgcagaactgattctgaaaccaagacttggagagccagcaaatgtgtcaga aatccgcaccaagtggtgggaatccaagaactcgttagagatgattaccaagctacccagaaaatacaacatagaaagaa acttgctggaaggtctcatcaagtatggggaaactaactatgccaatgcatttcaaaagatccaccgcaacacacgcgac atcaaagatgtggcgttcaaggaagaaagagactacaataaagatatgtcgttcaaagaggaaaaagatggagaggaaaa ccaaaacggagagagcgaggtaaccagccagaatcgtttagttcccactgtggtcgacgcccacaatattaaagactaca caataacagatgtggtacttcctctgccaggctttgatgttatgtacccacaaaatgaagtggaaagttggtatggagaa atgatggcagaagatggacttcaaatggaaaacctcaaacactctaacaggcaatatgcactacctggagcctacagacg aatgatcatcatgccaaaagacgtggagtggaggatgggtaaatactctgacgttaccaaggatctgacctccagtgacc ttgacatcattcacgataaaaaacctccagtatcagaaccagatggtacaatgacagccctaatgatagagatgacacta acatcctcctgttacgctactatggccttgagagaggttacaaagaccgatacatcatctgctcaccagtcaacactaaa taaaggcaaccaagcagaaaagacacttacctcacctgtcaaatctgaataa |
|
| Transcript ID | pfu_aug2.0_1143.1_11462.t3 |
| Definition | - |
>pfu_aug2.0_1143.1_11462.t3 atgacccgcaggaaaagaggaggggcatggagaggtgttaatagaggtggaggacgtggtcgagggagagggcgtggtgg acaccatggtcaggagcaacaaggtgaaggtcagataacttcacctgaaggtgctgatgcactgctagatacaggggagg atggtaatacacaaagtgatgaactcagggaagctgatgagagaaaacttctgatgatggatgaagataaggaaaaagag gaggagggggaggagcaaggaggaggaggagatgggagggggaggaggaatgaggatattctttaa |
|
| Transcript ID | pfu_aug2.0_1143.1_11462.t4 |
| Definition | - |
>pfu_aug2.0_1143.1_11462.t4 atgtacatgtattctgacttcattgtgcatgaaattgctcaggatggacagattgtaaaactgacgagtttagatgtgga agacacaggtgcaactgacataaaagaggaggatgaaggtgttgtatatgagggtatcctgacagaggaacaagaataca aactggttgagtttagtgctgatccacgggaagacagaatcattgacatatcgacatctgatgataaagaagaaagaaaa aggattcatcaccatataaagtccaagtataaaaatctggagtctgacacagtgtttgaagatgacgtaccgtttatacg tgtcgtccaacaggggaaggcacgacggaataaacatgcccagtataaaagagacttgattgactggccaaagaatcttg ggaaatactgtcgatttgtgctgtacaaggaaaactttgacactggtgactgtataggaagactgtcaaagtattttcac atcaataagaacatgtttcaacatgctggaaccaaagacaagcgagccataacctcccaagaagtgacagtctacagagt aagagcagaaaggctccagaaggcaaatagatacttttaccgcatggcacttggtaatttcagatatgttgagcagcccc ttaagttgggacaactacaaggaaatagatttaccattgtgctaagaaatgtttgtggtgacatgactgaaatcaacaag gcaatgacttcattgaaagaatctggattcatcaattattatggaatgcaaagatttggtacaacggccattcctaccca tcaagttggcagagctatacttaaaagtgattataaagaggctgcagaactgattctgaaaccaagacttggagagccag caaatgtgtcagaaatccgcaccaagtggtgggaatccaagaactcgttagagatgattaccaagctacccagaaaatac aacatagaaagaaacttgctggaaggtctcatcaagtatggggaaactaactatgccaatgcatttcaaaagatccaccg caacacacgcgacatcaaagatgtggcgttcaaggaagaaagagactacaataaagatatgtcgttcaaagaggaaaaag atggagaggaaaaccaaaacggagagagcgaggtaaccagccagaatcgtttagttcccactgtggtcgacgcccacaat attaaagactacacaataacagatgtggtacttcctctgccaggctttgatgttatgtacccacaaaatgaagtggaaag ttggtatggagaaatgatggcagaagatggacttcaaatggaaaacctcaaacactctaacaggcaatatgcactacctg gagcctacagacgaatgatcatcatgccaaaagacgtggagtggaggatgggtaaatactctgacgttaccaaggatctg acctccagtgaccttgacatcattcacgataaaaaacctccagtatcagaaccagatggtacaatgacagccctaatgat agagatgacactaacatcctcctgttacgctactatggccttgagagaggttacaaagaccgatacatcatctgctcacc agtcaacactaaataaaggcaaccaagcagaaaagacacttacctcacctgtcaaatctgaataa |
|
Protein
| Protein ID | pfu_aug2.0_1143.1_11462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11462.t1 MKIRKKRRRGRSKEEEEMGGGGGMRIFFKEEDVGITEYIGHHTGFHGVIKQRYSDFIVHEIAQDGQIVKLTSLDVEDTGA TDIKEEDEGVVYEGILTEEQEYKLVEFSADPREDRIIDISTSDDKEERKRIHHHIKSKYKNLESDTVFEDDVPFIRVVQQ GKARRNKHAQYKRDLIDWPKNLGKYCRFVLYKENFDTGDCIGRLSKYFHINKNMFQHAGTKDKRAITSQEVTVYRVRAER LQKANRYFYRMALGNFRYVEQPLKLGQLQGNRFTIVLRNVCGDMTEINKAMTSLKESGFINYYGMQRFGTTAIPTHQVGR AILKSDYKEAAELILKPRLGEPANVSEIRTKWWESKNSLEMITKLPRKYNIERNLLEGLIKYGETNYANAFQK |
|
| Protein ID | pfu_aug2.0_1143.1_11462.t2 |
| Definition | - |
>pfu_aug2.0_1143.1_11462.t2 MKIRKKRRRGRSKEEEEMGGGGGMRIFFKEEDVGITEYIGHHTGFHGVIKQRYSDFIVHEIAQDGQIVKLTSLDVEDTGA TDIKEEDEGVVYEGILTEEQEYKLVEFSADPREDRIIDISTSDDKEERKRIHHHIKSKYKNLESDTVFEDDVPFIRVVQQ GKARRNKHAQYKRDLIDWPKNLGKYCRFVLYKENFDTGDCIGRLSKYFHINKNMFQHAGTKDKRAITSQEVTVYRVRAER LQKANRYFYRMALGNFRYVEQPLKLGQLQGNRFTIVLRNVCGDMTEINKAMTSLKESGFINYYGMQRFGTTAIPTHQVGR AILKSDYKEAAELILKPRLGEPANVSEIRTKWWESKNSLEMITKLPRKYNIERNLLEGLIKYGETNYANAFQKIHRNTRD IKDVAFKEERDYNKDMSFKEEKDGEENQNGESEVTSQNRLVPTVVDAHNIKDYTITDVVLPLPGFDVMYPQNEVESWYGE MMAEDGLQMENLKHSNRQYALPGAYRRMIIMPKDVEWRMGKYSDVTKDLTSSDLDIIHDKKPPVSEPDGTMTALMIEMTL TSSCYATMALREVTKTDTSSAHQSTLNKGNQAEKTLTSPVKSE |
|
| Protein ID | pfu_aug2.0_1143.1_11462.t3 |
| Definition | - |
>pfu_aug2.0_1143.1_11462.t3 MTRRKRGGAWRGVNRGGGRGRGRGRGGHHGQEQQGEGQITSPEGADALLDTGEDGNTQSDELREADERKLLMMDEDKEKE EEGEEQGGGGDGRGRRNEDIL |
|
| Protein ID | pfu_aug2.0_1143.1_11462.t4 |
| Definition | - |
>pfu_aug2.0_1143.1_11462.t4 MYMYSDFIVHEIAQDGQIVKLTSLDVEDTGATDIKEEDEGVVYEGILTEEQEYKLVEFSADPREDRIIDISTSDDKEERK RIHHHIKSKYKNLESDTVFEDDVPFIRVVQQGKARRNKHAQYKRDLIDWPKNLGKYCRFVLYKENFDTGDCIGRLSKYFH INKNMFQHAGTKDKRAITSQEVTVYRVRAERLQKANRYFYRMALGNFRYVEQPLKLGQLQGNRFTIVLRNVCGDMTEINK AMTSLKESGFINYYGMQRFGTTAIPTHQVGRAILKSDYKEAAELILKPRLGEPANVSEIRTKWWESKNSLEMITKLPRKY NIERNLLEGLIKYGETNYANAFQKIHRNTRDIKDVAFKEERDYNKDMSFKEEKDGEENQNGESEVTSQNRLVPTVVDAHN IKDYTITDVVLPLPGFDVMYPQNEVESWYGEMMAEDGLQMENLKHSNRQYALPGAYRRMIIMPKDVEWRMGKYSDVTKDL TSSDLDIIHDKKPPVSEPDGTMTALMIEMTLTSSCYATMALREVTKTDTSSAHQSTLNKGNQAEKTLTSPVKSE |
|