Gene
| Gene Model ID | pfu_aug2.0_1143.1_11463 |
|---|---|
| Locus | scaffold1143.1 : 26669 ... 46925 : - |
| To GenomeBrowser | scaffold1143.1:26669..46925 |
| Genes list of scaffold | scaffold1143.1 |
| Synonym | pfu_aug1.0_15981.1_18293 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1143.1_11463.t1 | 4 | 1 | PHD | 21 | 66 | 1.9e-10 | 40.2 | 2.6e-14 | 1.9e-10 | 40.2 |
| pfu_aug2.0_1143.1_11463.t1 | 4 | 2 | PHD | 792 | 807 | 1.9e-10 | 40.2 | 0.67 | 5000.0 | -2.8 |
| pfu_aug2.0_1143.1_11463.t1 | 4 | 3 | PHD | 849 | 867 | 1.9e-10 | 40.2 | 1.2 | 9200.0 | -3.6 |
| pfu_aug2.0_1143.1_11463.t1 | 4 | 4 | PHD | 941 | 955 | 1.9e-10 | 40.2 | 0.38 | 2800.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1143.1_11463.t1 | gi|658876676|ref|XP_008421352.1| | PREDICTED: uncharacterized protein LOC103473143 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_1143.1_11463.t1 | gi|688549934|ref|XP_009298912.1| | PREDICTED: uncharacterized protein si:dkey-26m3.1 isoform X2 [Danio rerio] | 0.0 |
| pfu_aug2.0_1143.1_11463.t1 | gi|688563038|ref|XP_005166373.2| | PREDICTED: uncharacterized protein LOC101882062 isoform X4 [Danio rerio] | 0.0 |
| pfu_aug2.0_1143.1_11463.t1 | gi|688563074|ref|XP_009301200.1| | PREDICTED: uncharacterized protein LOC101882062 isoform X18 [Danio rerio] | 0.0 |
| pfu_aug2.0_1143.1_11463.t1 | gi|688563044|ref|XP_005166371.2| | PREDICTED: uncharacterized protein LOC101882062 isoform X6 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1143.1_11463.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11463.t1 atgtctcaggcaggggtggataacaatatcattagcgtaaaagaggaggaacaagtatggtgtgtgtgtaaatcagcaag tgccagtggatttatcataagctgtgacaaatgtaagaaatggtaccatggattatgtataggtattgatgagaaggaag cacaaatgatcgacaaattcatttgtattgcttgcaagggatctcctcagggactagccacatctgatactagaaaacaa caacaaactcaaaaacaagatacgaatgataaacctgaccttgtcgaaaagcaaaatgcacttggagtacataacctagt aaaaaaacaaagcccattccatgcaatgccgagtaatttgtcgatatcctgtagtcacaaccaaagaactgtcactgaag tgtcaaaaaatgataaacattgggaagaagtagaacagagaaatgatgtgagggaagtgagaaggatgcaggagcagaca ttaacaaaggcagcaacttttcagaatgatcatgtctcatcattgatgttagataagtgtataatgttgcctagaattct aagaagaacaaaaagaacaagtactaaacaagctaaaaatacacaaacaacagcaaatgagcagtttcaaaaagtgcaaa gtcgggttcttgaagaagtaccaagatatgctgcagggtcactaagacttatcactaaagatgttgaagtagcaccaata ccctttactgcagatgctgaaacagcacaaagacccgtcacttacaatgctgaaacagtacaaaggccggtcactaacaa tgctgaaacagcacaaagacctgtcactaaggatgctgaaacagcacaaagacctgtcactaacgatgctgaaacagcac aaagacctgtcactaacaatgctgaaatggcactaagatctgtcactaacagtgctgaaacggcacaaaaacctgtcact aaggatgctgaaacggcactaagatctgtcactaacagtgctgaaacggcacaaagacctgtcactaaggatgctgaaac ggcacaaatatctgtcagtaacggtgctgaaacagcatcaagacccatattgaaagataccacaacaataacagccccaa gacaatgtacccaacagactgaagtagcagcaagactaatttccaatcattcagaagaatcaagattagttactgaacat gctgaaatgacacccttcaaagtctctagtgcttacataatttttccaatttttaaagacaattctggtaatgacatttc taaacctcagattttgaatgcatgtggaacattgggaaattggaatgctcaggcttttcagactaatattctagatcatg cagggaaaagtagtccagctttcttagtacctaagtgcacggacaagccagttgtcatggaaacttctataaattccaat agcatatcaccggcacctgagcataaaggtcaacattgtccgcaagaaatggatagtttacttctaaaaaaaaaagcgaa agtgcaagctcagaagactcttacactttctaaacatgttttaaatgagttgaatccaaagacagacgggagaaatcatg gtgacaaggaaaaacacacaattgttgaagcatttgagatcctaagacaagaattgccaagaatggataataagaaacat gctacaagacctgaaatattagatgaagcagtttctgcaatacggagtcttgacatggcctctattcgattacagagaga aattgttagagaaactaggcaccaagagaagtcgtcaagagaaatagacaaagaagtaaatgtagatgatcaaatggacc acagaggggacaaaaggaaaagaaaaatgtctgctgcgtacttaaggcacatacaatcggagagaaatttgaagtcatac gacaaggatagccatgctgagtctgatgtggattctgatatggacccgggctatcagcctgtaaaaggtccatcttgtga tggggaaagttctttttctgaggatagtgagagtagtgaatatactgacaaagatgaaaatgagatgatctcagagattg ggaaggaaagtggtcaaatcaagccagcctcatcaaaaagtatttatgatcaaagagggccataccaggaaaaaatacat gcttgcctttactgcaacaaattgatgatggagatggcaagtcatttaaaaaaagaacatcataatgaagctcttgttca aagaattttaaaatgttcaaagagaagcaaggaaagaagagtaatgtggcaagaacttatcagcaaaggtgactattgcc atgatatggacgttttaaaaaaagggagtgggacgttaataccaaaaacaacatgtaaagatgaggatatccataaacta gtaccttgtccttactgtaaagggttgttcaagaaaagatttcaaaagcaacatcggaaaatgtgtttgtttagaaagaa tgaatccatctcagaccaagtcagaaatggcgatatccaagatagtgattcgtctgaagaatattgtgattctcaacaag gctctgacagtaatgaaggagaagtaacgtgtcatgcctgcttgttttgtggtaaagtaatggcagagatctccagacat ttgaggattatacattctgaagaagctgcagtttcaaacatcctaaaacatccaaaacatagcaaggaaagaaaaatatt gtggttagagcttgtcaacaagggagacttttcccacaatttaaaagtactggataaaggagagggaatgctgattccca agaaaaggtgcaaaataaaatatgaagattttaagaaattggtgccctgtcaatggtgcaaggcattttatgtaaaaagt gatctttataaacatagtaagacatgtgtggctaaaggaaaaggaactgtgaagaaccatgtaagagatagcatgatgtt actgccagggaggaaatgttcaaaaaacttacagcgaaatgtgctatgcacaatgagggatgatgaaataacaaaaatag tcaaatcagatgaacggattctacagtttggagaaaggatatctgacatcaatgttagagtttcacaaaaactacgtgaa cttggccgcttggtcctggaaagcaagaagttgtctggtgaagtctgctgtatcgatgaccttctgaaaacagaaaattg ggacactatgataaaatctgtcaagataatcgcaggatacaacagtgaaaacaacaggtatgcagtaccatcttttgcct taaaaattggaagtagcttacataaatgtgctatctacctccaatctcaaggatgcacagagggagatgaaacgaagaag caaatagctgaaagttttttaacaaagtatgaaaaggattggaacagtagtatatctgaacatgcagtgtcttctctaga agcaacaaattttggtaggtctcttctcttacctctggttgaaaatatgctgaaactaataaactacttaaggaaggaaa tggaaagggtttaccaagtggtaaaggaagaatttgagtttggaatgtatttcacgctagcacaaatgtgcttatcgatg ataatcctgttcaacagaaagcgaagtagtttggtagagaaaatgaagttaaaagacttccaggattctgaaaagctaaa tggagaaccagaaccaagaacaagcaaacttagtgaatttgagaggaagctatgtaaaacccatacaaggatagaagtta tgggaaaaagaggagggaaagaggtagtgctgttcaccaaagaaacggaggacattcttgaatttcttatttcaaacaga gagaaagcaaatgttttaactgactttctttttccaaaacgaagacattcaaaattcccatatagcggtaacaaattaat tagcaagtttgccatagaagcaggagtgcaggatccttctgccttgatctcctccaaattcaaaaaacaagtaggaacaa taacacagattctgagtatggatgaaaactcacaagacattttcctaatactacaagaatacggtattgaagttcaccaa gaagacaagagactgccagaagaccctttgcatattgcgaaagtggtgaaagtgctgaacaatatcaataatgttggaaa ggagaccaatttccgaggtatcaagtttgaagatgtacagcttggtaaagaagaaacattaaaaatcgagtcagaaagtt cagaagatgaggaagtacaaaaactagtgaaaacaaaaggaaaaggcaaaaaacatcgttggacaattgaagagaagaaa gcagtcgcaaaatatttcaaggaagacattgaagagcgtaaacttccaggaatgcatatgtgtctagatgccataaaatt ggagccatgtttgaggaggtttggatgggtagccatcaaagctgctgtacgcaatctcataaagaaaaagaagttgctga ctagaaagtcttga |
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Protein
| Protein ID | pfu_aug2.0_1143.1_11463.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11463.t1 MSQAGVDNNIISVKEEEQVWCVCKSASASGFIISCDKCKKWYHGLCIGIDEKEAQMIDKFICIACKGSPQGLATSDTRKQ QQTQKQDTNDKPDLVEKQNALGVHNLVKKQSPFHAMPSNLSISCSHNQRTVTEVSKNDKHWEEVEQRNDVREVRRMQEQT LTKAATFQNDHVSSLMLDKCIMLPRILRRTKRTSTKQAKNTQTTANEQFQKVQSRVLEEVPRYAAGSLRLITKDVEVAPI PFTADAETAQRPVTYNAETVQRPVTNNAETAQRPVTKDAETAQRPVTNDAETAQRPVTNNAEMALRSVTNSAETAQKPVT KDAETALRSVTNSAETAQRPVTKDAETAQISVSNGAETASRPILKDTTTITAPRQCTQQTEVAARLISNHSEESRLVTEH AEMTPFKVSSAYIIFPIFKDNSGNDISKPQILNACGTLGNWNAQAFQTNILDHAGKSSPAFLVPKCTDKPVVMETSINSN SISPAPEHKGQHCPQEMDSLLLKKKAKVQAQKTLTLSKHVLNELNPKTDGRNHGDKEKHTIVEAFEILRQELPRMDNKKH ATRPEILDEAVSAIRSLDMASIRLQREIVRETRHQEKSSREIDKEVNVDDQMDHRGDKRKRKMSAAYLRHIQSERNLKSY DKDSHAESDVDSDMDPGYQPVKGPSCDGESSFSEDSESSEYTDKDENEMISEIGKESGQIKPASSKSIYDQRGPYQEKIH ACLYCNKLMMEMASHLKKEHHNEALVQRILKCSKRSKERRVMWQELISKGDYCHDMDVLKKGSGTLIPKTTCKDEDIHKL VPCPYCKGLFKKRFQKQHRKMCLFRKNESISDQVRNGDIQDSDSSEEYCDSQQGSDSNEGEVTCHACLFCGKVMAEISRH LRIIHSEEAAVSNILKHPKHSKERKILWLELVNKGDFSHNLKVLDKGEGMLIPKKRCKIKYEDFKKLVPCQWCKAFYVKS DLYKHSKTCVAKGKGTVKNHVRDSMMLLPGRKCSKNLQRNVLCTMRDDEITKIVKSDERILQFGERISDINVRVSQKLRE LGRLVLESKKLSGEVCCIDDLLKTENWDTMIKSVKIIAGYNSENNRYAVPSFALKIGSSLHKCAIYLQSQGCTEGDETKK QIAESFLTKYEKDWNSSISEHAVSSLEATNFGRSLLLPLVENMLKLINYLRKEMERVYQVVKEEFEFGMYFTLAQMCLSM IILFNRKRSSLVEKMKLKDFQDSEKLNGEPEPRTSKLSEFERKLCKTHTRIEVMGKRGGKEVVLFTKETEDILEFLISNR EKANVLTDFLFPKRRHSKFPYSGNKLISKFAIEAGVQDPSALISSKFKKQVGTITQILSMDENSQDIFLILQEYGIEVHQ EDKRLPEDPLHIAKVVKVLNNINNVGKETNFRGIKFEDVQLGKEETLKIESESSEDEEVQKLVKTKGKGKKHRWTIEEKK AVAKYFKEDIEERKLPGMHMCLDAIKLEPCLRRFGWVAIKAAVRNLIKKKKLLTRKS |
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