Gene
| Gene Model ID | pfu_aug2.0_1143.1_11466 |
|---|---|
| Locus | scaffold1143.1 : 145478 ... 158675 : - |
| To GenomeBrowser | scaffold1143.1:145478..158675 |
| Genes list of scaffold | scaffold1143.1 |
| Synonym | pfu_aug1.0_8922.1_45964 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1143.1_11466.t1 | 2 | 1 | TIL | 42 | 94 | 2.6e-06 | 27.4 | 6.9e-10 | 2.6e-06 | 27.4 |
| pfu_aug2.0_1143.1_11466.t1 | 4 | 1 | EGF_3 | 57 | 84 | 6.3e-07 | 29.2 | 4.0 | 15000.0 | -6.6 |
| pfu_aug2.0_1143.1_11466.t1 | 4 | 2 | EGF_3 | 118 | 125 | 6.3e-07 | 29.2 | 2.3 | 8500.0 | -3.2 |
| pfu_aug2.0_1143.1_11466.t1 | 4 | 3 | EGF_3 | 141 | 170 | 6.3e-07 | 29.2 | 1.7e-10 | 6.3e-07 | 29.2 |
| pfu_aug2.0_1143.1_11466.t1 | 2 | 2 | TIL | 145 | 172 | 2.6e-06 | 27.4 | 4.0 | 15000.0 | -9.4 |
| pfu_aug2.0_1143.1_11466.t1 | 1 | 1 | VWD | 177 | 325 | 2.9e-18 | 66.5 | 1.7e-21 | 6.1e-18 | 65.4 |
| pfu_aug2.0_1143.1_11466.t1 | 4 | 4 | EGF_3 | 197 | 213 | 6.3e-07 | 29.2 | 0.46 | 1700.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1143.1_11466.t1 | gi|556990107|ref|XP_005999885.1| | PREDICTED: IgGFc-binding protein-like [Latimeria chalumnae] | 7.0e-30 |
| pfu_aug2.0_1143.1_11466.t1 | gi|632986747|ref|XP_007910409.1| | PREDICTED: IgGFc-binding protein-like [Callorhinchus milii] | 3.0e-29 |
| pfu_aug2.0_1143.1_11466.t1 | gi|641787122|ref|XP_008175628.1| | PREDICTED: zonadhesin-like, partial [Chrysemys picta bellii] | 1.0e-28 |
| pfu_aug2.0_1143.1_11466.t1 | gi|734649043|ref|XP_010753781.1| | PREDICTED: zonadhesin-like [Larimichthys crocea] | 3.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1143.1_11466.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11466.t1 atgaaaatgcaacatgcgcaaaagacatcaacggagaaaggagatgtaaatgtaactttggcttcgaaggtgacggagtt gtctcctgcagttaattttccaggcataaataaaagtcccatctgtaaagaacagcacacgcaatactacaggagaggag aagcttgtaaccagacatgtgaaaactacgcagcatcagagatttgctctacaaatgacgagataggttgcttctgtagg aatggatatgccttccataagggccgctgtgtgaatgcgtcatcggaatgcggatgtatggacaaaaataataattatca cgagataggggaatcttggtctgggcagaagtgtggcgaaacatattcatgcagctcaggagaaacacgttctaatgtta ccacgttgtctgaaggggcaatctgccaccctaaagcatcatgtaagacacagaaatctgggaagaggagttgtaaatgc aaatatggttaccaaggggatggcgtcaacttatgtagaaaatgtttctgcatggtgttcagtaggactaaatatcgtac ctttgacagacagataatggactttaatgaaacgtgtaaatacactctggcaaagacaacagatccgaatatcacatgtg ccttccatatcaaggttaagaacgaacaccgttatggttataccaaaaacgcatataccaaatatgtggagatagatgtt catggttacacaataacgcttttggacaatatgaccatacaggttgacggaattatcaagagtcatccatattttaagat accggaacatggactgacagtacgaagaagtggttcgtatttgaagcttagagacggatgcggattgaaagtaggattta atggaagacatattgctagagttgtagtccctgccactataaattccaagctaactggactatgcggtaactgtaacgga aagaaagatgattacggcactgggactgggttaagtgactacgaaatcgctaaaagctacgaaatacctggatcttgcaa gcaaaactaa |
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Protein
| Protein ID | pfu_aug2.0_1143.1_11466.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11466.t1 MKMQHAQKTSTEKGDVNVTLASKVTELSPAVNFPGINKSPICKEQHTQYYRRGEACNQTCENYAASEICSTNDEIGCFCR NGYAFHKGRCVNASSECGCMDKNNNYHEIGESWSGQKCGETYSCSSGETRSNVTTLSEGAICHPKASCKTQKSGKRSCKC KYGYQGDGVNLCRKCFCMVFSRTKYRTFDRQIMDFNETCKYTLAKTTDPNITCAFHIKVKNEHRYGYTKNAYTKYVEIDV HGYTITLLDNMTIQVDGIIKSHPYFKIPEHGLTVRRSGSYLKLRDGCGLKVGFNGRHIARVVVPATINSKLTGLCGNCNG KKDDYGTGTGLSDYEIAKSYEIPGSCKQN |
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