Gene
| Gene Model ID | pfu_aug2.0_1143.1_11468 |
|---|---|
| Locus | scaffold1143.1 : 167997 ... 187745 : - |
| To GenomeBrowser | scaffold1143.1:167997..187745 |
| Genes list of scaffold | scaffold1143.1 |
| Synonym | pfu_aug1.0_8922.1_45962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1143.1_11468.t1 | 10 | 1 | TIL | 34 | 68 | 2.2e-19 | 69.3 | 1.7 | 6400.0 | -2.7 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 2 | TIL | 86 | 143 | 2.2e-19 | 69.3 | 3.5e-11 | 1.3e-07 | 31.6 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 1 | EGF_3 | 112 | 131 | 1.8e-09 | 37.3 | 2.0 | 7600.0 | -3.1 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 3 | TIL | 158 | 170 | 2.2e-19 | 69.3 | 0.1 | 380.0 | 1.3 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 2 | EGF_3 | 162 | 175 | 1.8e-09 | 37.3 | 0.9 | 3300.0 | -1.9 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 4 | TIL | 186 | 217 | 2.2e-19 | 69.3 | 0.036 | 130.0 | 2.7 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 3 | EGF_3 | 187 | 217 | 1.8e-09 | 37.3 | 3.3e-07 | 0.0012 | 18.7 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 4 | EGF_3 | 342 | 350 | 1.8e-09 | 37.3 | 1.8 | 6800.0 | -2.9 |
| pfu_aug2.0_1143.1_11468.t1 | 2 | 1 | VWD | 347 | 499 | 0.0 | 188.3 | 5.1e-31 | 1.9e-27 | 96.4 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 5 | TIL | 624 | 677 | 2.2e-19 | 69.3 | 3.3e-14 | 1.2e-10 | 41.2 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 5 | EGF_3 | 657 | 665 | 1.8e-09 | 37.3 | 0.32 | 1200.0 | -0.5 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 6 | EGF_3 | 722 | 752 | 1.8e-09 | 37.3 | 8.3e-07 | 0.0031 | 17.4 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 6 | TIL | 730 | 754 | 2.2e-19 | 69.3 | 0.33 | 1200.0 | -0.4 |
| pfu_aug2.0_1143.1_11468.t1 | 2 | 2 | VWD | 883 | 1035 | 0.0 | 188.3 | 3.1e-31 | 1.2e-27 | 97.1 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 7 | TIL | 1162 | 1216 | 2.2e-19 | 69.3 | 9.2e-10 | 3.4e-06 | 27.0 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 7 | EGF_3 | 1232 | 1248 | 1.8e-09 | 37.3 | 0.36 | 1300.0 | -0.7 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 8 | EGF_3 | 1255 | 1288 | 1.8e-09 | 37.3 | 1.8e-08 | 6.7e-05 | 22.7 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 8 | TIL | 1265 | 1290 | 2.2e-19 | 69.3 | 0.046 | 170.0 | 2.4 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 9 | TIL | 1294 | 1346 | 2.2e-19 | 69.3 | 2.0e-06 | 0.0076 | 16.3 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 9 | EGF_3 | 1368 | 1383 | 1.8e-09 | 37.3 | 0.13 | 490.0 | 0.8 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 10 | TIL | 1373 | 1412 | 2.2e-19 | 69.3 | 2.1 | 7800.0 | -3.0 |
| pfu_aug2.0_1143.1_11468.t1 | 10 | 10 | EGF_3 | 1393 | 1422 | 1.8e-09 | 37.3 | 2.5e-07 | 0.00094 | 19.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1143.1_11468.t1 | gi|696993981|ref|XP_009563931.1| | PREDICTED: zonadhesin-like [Cuculus canorus] | 0.0 |
| pfu_aug2.0_1143.1_11468.t1 | gi|698382765|ref|XP_009808333.1| | PREDICTED: zonadhesin-like, partial [Gavia stellata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1143.1_11468.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11468.t1 atgacagatttagtcgctacggacagttattgtgggcttttgacttccacaagcggaccatttaaacaatgcatcgctga tgatcccgaattggcctcggaatactatgaatcttgtaaagtggacgtttgtgagaatgaaggagaaccaagcttggaaa caatcaaatgtcagactttccagggatatgccgaggactgcaaagaagaaggattccatgtaaaatggagaacatctcgt ttctgtcctggaaagtgtgacgatcccaatatggaatataaagaatcgggtccaagatgcacgcctacttgtgtcaatca aaacatgaataacgattcgtgttctgacgagggtaaacatgtatcaggatgcttctgtaaagatgggtttgttttgagtg acataaaatgtgtacaaaaatccgaatgtggctgccgagatgtgaaaggtcaatattatccaattggtcatataaagaag tcatcttcttgcgtaccgtcagaagaatgcagaagagttaatggaagatctgttttcgtgaaactttcttcctcaatgtc ctgtcactcaatggccaaatgtaaacttaatacaaaaggagaggacgcttgtgtctgtggtgcaggattctatggggatg gatacaattgttcagcgatcccaaatataacccttccaagtaagaccaaaagagttaaggtttcattgcaattcatgaat gaatattctggaactgttgggaagcatgtcggaaaatctaaggaacacttgatcaaagcaatagcagagattatgaaaat cccgtttcatcgattatcagagatggacttacaagaaggcaataacagtgcaatggcgtcgttttacattcttcctaaac gtgacgaaggggcactatcaaagctaggatatgacgttaacaatcttcaacgattagttagaactaacgccttgcctgtc aatgatgttaatggaaagaaattgatgataaaccctaattatttcaaatacacgtcacaacgctcaagaccgtgtaggtg tacaggatctggagatccacactacaagacgtacgacggacaaattattgacttcatgggaacatgtcagtacacattaa caaagtcaactactgacaatgatacttgtgcattcaacgttgaagtaaaaaatgagcataggggctcaaatacagctgtt tcatatacaaaatatgtggaggtagacacctttggtgtaagggcttctctcaagaaaaatggaaaagtcctggttaacaa acagagtatttcattgccgttccaaagcacagacggaaatgttaagatttttcgaagcgggagatatgttcgaatgacat caatatgtgatgttacagtagaatttgatggtcattcttatgtgagtgtccagatacccgataaatatcggggttttacc acagggatatgtggtgtatgtgatgataaacagaacgattataagacaaaagatggaaaagacgtatcaggttctggcga tagagacaagttgatagggaatagctacaaagtgaagagatcttccgtagatggatgtgaggatgaacctgaacaaagtg ttacctgttcgaccgaactacaaagagaagtagagtcatatgatatttgtggtatcatttcaaatgagactggtcccttc agaaagtgtatccaagcttatccagatttagtaaagaattattttgatatttgtgtcttcgacgtctgtgcaaataaaga ttccaagcgtctaatggagatgatgcgatgtcaggcaatagaaggttgggctgaggagtgtgctgaatttagcatagctt ggagatcggacaaaaattgtccccttaattgtggtgagaatacagtatatgcaagctccgggacagcttgccccgccact tgtatggatcttcgagcaccaagtaactgtcttgatccacccgtggaaagctgcctgtgtaaggatgggtttgttctcag tgatgataagtgtgtccctcggcataaatgcggatgtgttgactctaaagggaaatattatgagattggtgagaaaacag tgaatgagacatgcggtggtttgatatatgaatgtcaagggcaaaacaacgatacatcgaaattgataccactggaagag ggaaaaccatgtcatcagaacgcaacctgtggtttcgatgaggacggcatacagagatgtatgtgtctgaaaggattcat cggtgatggaactgaaaattgtcgacaaatgccgtctggcgttcgactagcgtccatgtctatgacgttcaacgatgctt atgatgacgcaattggcgatgattacaacaagcatagactttctcttatgagggcaattgcatctacactaaagatatct agaccaagagttacaaatctgcgtattagaaatgaatctagagaaaatggatcaaccgaggttacatttgatctactacc taaacgagtgggatcatcggaagcttcgctatctcaagctatcaacgctctctcattgagattttccaagaaaaaattga agataccaatcgtatctgacaaaggtttcttgactccagattacaagtcattggacttcaagactgaccaatcaaaacta catacctgtctcggatatggtgacccacactacaagacgtttgatggacagctaatcgacttcatgggaacttgtaaata cacgatggtgaaggcatcgagtcttgatagtcactgtgcattccatgtcaaggttcagaatgaatatagaggcggcaaca cgaatgtatccttcactaagtttatagattttgatatatatggagcgacaatacggcttcttaagcaaaagaaagtgctg gtaaatagagagaggaagaatgttccattccaaatgcaaaatgccgatatatccatcgctgaaactggtcaatatatcca ggtggattctggatgtggagtttctgtaaagtttgatggagacagtactgtaagcgtccatgtacctgatacatacatga ataaaacagaagggatatgtggaaattttgatggatatgaaaacgattatagaacaaagaatggaaaagatgtttctaca gagaaatataaatttgctctcattggagacagctacaaaattgatgcagaatcccaaacgggttgtaaaaatggcaaatc agccttcggggtctgcagttcggaaacattaaaggaagttgaaagcgtaaatagttgtggcataattatggacgaaaatg gaccttttcaagaatgtatagaagaagatccaatccatgcgaaaaattttttcaagacatgcaagtttgacgtatgttct tatgaagatgacatagttcgtagaacaattttactttgtgacgacattgtagcatttgcattgcattgtgaggcaatagg cttttcggtaagatggaggacgtcatccttgtgtcccatggcttgtaaaaatgcaaccgaggtctttaagtcagatggta ctggttgcgaagcgtcatgtcgagatccttatgcagaggaaaagtgtgtttatgaaaacacagagggatgtttctgtcgt gagggactcatcaggagtcacactcactgtgtcgacccgtcattatgtggctgtatagatactaacggcgaatattatga gcttggtgataggaaaacgaatacgaactgtacccactctttggaatgtaggaaagtcggtaccaaatcaaagctaatag acgtacaaacgaacaaatgccatcttttagctaattgtgaattcaacgacgagggacagagaacctgcatctgtaaggaa ggatatactggtgacggaaacacaacatgcaaatctatctgtacagaaccttatacgaaatactacagaaaaggtcaagc ttgtcgacaaacctgccattcgtattcggcatcaaaaaggtgtgtgccatatgaagaaaaaggttgtttctgtatggagg ggtatgctgaacataatggtagctgtgttcaggaaacttctggttgtggctgtactgataataaggataaatatcatgag atcgatgatacttggtccggagataaatgtggcgaggagtatacatgcagtaacgtagggaacggctctgttgtgactga aacgagaaaaggagacgtttgtcatgaaaatgcgacttgtattgaagacaatgtaggacaaaagaactgtaaatgcaaat ttggctttgatggggatggcgtgaattcgtgttcatatgtatcgaaaatgcgtcagagtcatcaaacgccttttataccg tggatatga |
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Protein
| Protein ID | pfu_aug2.0_1143.1_11468.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1143.1_11468.t1 MTDLVATDSYCGLLTSTSGPFKQCIADDPELASEYYESCKVDVCENEGEPSLETIKCQTFQGYAEDCKEEGFHVKWRTSR FCPGKCDDPNMEYKESGPRCTPTCVNQNMNNDSCSDEGKHVSGCFCKDGFVLSDIKCVQKSECGCRDVKGQYYPIGHIKK SSSCVPSEECRRVNGRSVFVKLSSSMSCHSMAKCKLNTKGEDACVCGAGFYGDGYNCSAIPNITLPSKTKRVKVSLQFMN EYSGTVGKHVGKSKEHLIKAIAEIMKIPFHRLSEMDLQEGNNSAMASFYILPKRDEGALSKLGYDVNNLQRLVRTNALPV NDVNGKKLMINPNYFKYTSQRSRPCRCTGSGDPHYKTYDGQIIDFMGTCQYTLTKSTTDNDTCAFNVEVKNEHRGSNTAV SYTKYVEVDTFGVRASLKKNGKVLVNKQSISLPFQSTDGNVKIFRSGRYVRMTSICDVTVEFDGHSYVSVQIPDKYRGFT TGICGVCDDKQNDYKTKDGKDVSGSGDRDKLIGNSYKVKRSSVDGCEDEPEQSVTCSTELQREVESYDICGIISNETGPF RKCIQAYPDLVKNYFDICVFDVCANKDSKRLMEMMRCQAIEGWAEECAEFSIAWRSDKNCPLNCGENTVYASSGTACPAT CMDLRAPSNCLDPPVESCLCKDGFVLSDDKCVPRHKCGCVDSKGKYYEIGEKTVNETCGGLIYECQGQNNDTSKLIPLEE GKPCHQNATCGFDEDGIQRCMCLKGFIGDGTENCRQMPSGVRLASMSMTFNDAYDDAIGDDYNKHRLSLMRAIASTLKIS RPRVTNLRIRNESRENGSTEVTFDLLPKRVGSSEASLSQAINALSLRFSKKKLKIPIVSDKGFLTPDYKSLDFKTDQSKL HTCLGYGDPHYKTFDGQLIDFMGTCKYTMVKASSLDSHCAFHVKVQNEYRGGNTNVSFTKFIDFDIYGATIRLLKQKKVL VNRERKNVPFQMQNADISIAETGQYIQVDSGCGVSVKFDGDSTVSVHVPDTYMNKTEGICGNFDGYENDYRTKNGKDVST EKYKFALIGDSYKIDAESQTGCKNGKSAFGVCSSETLKEVESVNSCGIIMDENGPFQECIEEDPIHAKNFFKTCKFDVCS YEDDIVRRTILLCDDIVAFALHCEAIGFSVRWRTSSLCPMACKNATEVFKSDGTGCEASCRDPYAEEKCVYENTEGCFCR EGLIRSHTHCVDPSLCGCIDTNGEYYELGDRKTNTNCTHSLECRKVGTKSKLIDVQTNKCHLLANCEFNDEGQRTCICKE GYTGDGNTTCKSICTEPYTKYYRKGQACRQTCHSYSASKRCVPYEEKGCFCMEGYAEHNGSCVQETSGCGCTDNKDKYHE IDDTWSGDKCGEEYTCSNVGNGSVVTETRKGDVCHENATCIEDNVGQKNCKCKFGFDGDGVNSCSYVSKMRQSHQTPFIP WI |
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