Gene
Gene Model ID | pfu_aug2.0_1145.1_18130 |
---|---|
Locus | scaffold1145.1 : 139566 ... 147193 : + |
To GenomeBrowser | scaffold1145.1:139566..147193 |
Genes list of scaffold | scaffold1145.1 |
Synonym | pfu_aug1.0_10426.1_17626 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
gamma-aminobutyric acid type b receptor subunit 2 | GO:0004965 GO:0005515 GO:0007214 GO:0038039 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1145.1_18130.t1 | 1 | 1 | 7tm_3 | 20 | 292 | 6.2e-23 | 81.3 | 5.5e-27 | 8.2e-23 | 80.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1145.1_18130.t1 | gi|676476619|ref|XP_009060851.1| | hypothetical protein LOTGIDRAFT_165568 [Lottia gigantea] | 0.0 |
pfu_aug2.0_1145.1_18130.t1 | gi|390357966|ref|XP_003729145.1| | 0.0 | |
pfu_aug2.0_1145.1_18130.t1 | gi|260827605|ref|XP_002608755.1| | hypothetical protein BRAFLDRAFT_73975 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_1145.1_18130.t1 | gi|390353909|ref|XP_782175.3| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2 isoform X1 [Strongylocentrotus purpuratus] | 5.60519e-45 |
pfu_aug2.0_1145.1_18130.t1 | gi|514707528|ref|XP_005010671.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Anas platyrhynchos] | 8.99634e-43 |
Transcript
Transcript ID | pfu_aug2.0_1145.1_18130.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1145.1_18130.t1 atggaagtccgtacgataggacctggaacttttgcggtgtcctgtatagtaacaaccattggaattgtgttttctgtagg attcttaactttcaatgtgttccatagaaataaaagatttatcaagatgtcgagccccaagctgaacgtaatgataagta gtggtgggctcagccttaacattgcttgtctcatgtacgggatggacttctttttggcggagagatatccggaagcaacg gtgacatgtcagatccgtctatggttggtgacgctgggctttactctggtgtttggaccaatgtttgccaaggcttggag agtgtacttaatcttcagaaacgctggaataaaacgagtggtgatcagggacaccaaactgtttatgatgtattttactt tacaggtgatcagggacaccaaactgtttatgatgtccagtcttttcatgttagttgacatcgtcatactggtactatgg cagagcatagatatcatgaaatcacagaaagtcaagtatctcctgttgcttgacaaagaagaaaacggctcgtctgtcat ggaccacatcaacatacaggagtgctcgtcatccggtacatctgtgtggctttccattctatttctatggaaaacgggac tcctcggatttgggctatatttagcatggaaaacacgcaacgtgatgttacccgccatgcgagactccgtcagtatgatt gttagcattttgacaaccttgttgctgaccgcaccaaccataatgcttacgtcattattacgtcactcaccgaatgctat ttatatcacggaaatgacacttatcactgtttgtgtgtccgtggttcaggtcgccacattcttgccgaaggtgcattatt ggtggaaaagtccaattgatgtccccatccgaatgtcgcagtctacatatgacattaatcccaacgtaaagtcagagaac cccgaagaggagatgtttcagttagtgacggagaacatgtcgttgaaacgcgcaattactgagtcgagcggagtcgaaag caagaaagacataaacgaagatgacattgctacaaagcagcaggaacaaaatgtgtatgaaaatgaaatgaatattacaa attctttatcaagaaaagggaatcctttcccgcgaggaacaacgatgtacgagtcaattcggtcgagacaggatatcgcg ggatctgttgctaagagttacgatttggaggacaatgacgacacgttctcttacgtcagcagctatttaaatcctacatt tccgaagaaaaatttagactatactttaagaaatagtactctgtgcatctcggccgagtccgtgtccgctatagacaatg ataagctttacccatttccgggtgatttgaaccaatcaaattgtacctctgaatcacgtgatatttcaatatctagagaa acattagacggatcaaaacgagttaaaaatcaaaagaatcgatcgaagaaacaggctaaatcggacaaacctggtgtagt tatactagataactcaacagagataaatagctgttatgtttga |
Protein
Protein ID | pfu_aug2.0_1145.1_18130.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1145.1_18130.t1 MEVRTIGPGTFAVSCIVTTIGIVFSVGFLTFNVFHRNKRFIKMSSPKLNVMISSGGLSLNIACLMYGMDFFLAERYPEAT VTCQIRLWLVTLGFTLVFGPMFAKAWRVYLIFRNAGIKRVVIRDTKLFMMYFTLQVIRDTKLFMMSSLFMLVDIVILVLW QSIDIMKSQKVKYLLLLDKEENGSSVMDHINIQECSSSGTSVWLSILFLWKTGLLGFGLYLAWKTRNVMLPAMRDSVSMI VSILTTLLLTAPTIMLTSLLRHSPNAIYITEMTLITVCVSVVQVATFLPKVHYWWKSPIDVPIRMSQSTYDINPNVKSEN PEEEMFQLVTENMSLKRAITESSGVESKKDINEDDIATKQQEQNVYENEMNITNSLSRKGNPFPRGTTMYESIRSRQDIA GSVAKSYDLEDNDDTFSYVSSYLNPTFPKKNLDYTLRNSTLCISAESVSAIDNDKLYPFPGDLNQSNCTSESRDISISRE TLDGSKRVKNQKNRSKKQAKSDKPGVVILDNSTEINSCYV |