Gene
| Gene Model ID | pfu_aug2.0_11482.1_09808 |
|---|---|
| Locus | scaffold11482.1 : 1 ... 4748 : + |
| To GenomeBrowser | scaffold11482.1:1..4748 |
| Genes list of scaffold | scaffold11482.1 |
| Synonym | pfu_aug1.0_13650.1_68662 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein nov partial | GO:0005515 GO:0005622 GO:0007165 GO:0016020 GO:0031012 GO:0036477 GO:0043005 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11482.1_09808.t1 | 3 | 1 | TSP_1 | 7 | 13 | 2.1e-06 | 27.7 | 1.0 | 15000.0 | -5.5 |
| pfu_aug2.0_11482.1_09808.t1 | 3 | 2 | TSP_1 | 51 | 61 | 2.1e-06 | 27.7 | 0.048 | 720.0 | 0.4 |
| pfu_aug2.0_11482.1_09808.t1 | 3 | 3 | TSP_1 | 62 | 98 | 2.1e-06 | 27.7 | 1.4e-10 | 2.1e-06 | 27.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11482.1_09808.t1 | gi|733883708|ref|XP_010707591.1| | PREDICTED: protein NOV homolog, partial [Meleagris gallopavo] | 4.0e-10 |
| pfu_aug2.0_11482.1_09808.t1 | gi|26333291|dbj|BAC30363.1| | unnamed protein product [Mus musculus] | 4.0e-10 |
| pfu_aug2.0_11482.1_09808.t1 | gi|514764810|ref|XP_005024065.1| | PREDICTED: protein NOV [Anas platyrhynchos] | 4.0e-10 |
| pfu_aug2.0_11482.1_09808.t1 | gi|74196214|dbj|BAE33013.1| | unnamed protein product [Mus musculus] | 4.0e-10 |
| pfu_aug2.0_11482.1_09808.t1 | gi|6754876|ref|NP_035060.1| | protein NOV homolog precursor [Mus musculus] | 4.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_11482.1_09808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11482.1_09808.t1 tagtggctgtgccaggacagtgttgtcaccagtggacttgtaatggattcaattacacaaacaaaagtccaagacatgca gaatggacgggaccaagtgctaatatgatgatgattagtcatcctgcacaaggaccacgtgatgttgacatccagagtgc cgagccacagtgtacagacgagaaatctgattggtcaaggtgttcggtgacgtgtggagtaggaatttctttccgatata aaccaagaagctgtggcaaagagaaggaaacccgactctgttacctgaggccgtgtatggacaacgcattgtattctttg |
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Protein
| Protein ID | pfu_aug2.0_11482.1_09808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11482.1_09808.t1 VAVPGQCCHQWTCNGFNYTNKSPRHAEWTGPSANMMMISHPAQGPRDVDIQSAEPQCTDEKSDWSRCSVTCGVGISFRYK PRSCGKEKETRLCYLRPCMDNALYSL |
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