Gene
| Gene Model ID | pfu_aug2.0_11510.1_03092 |
|---|---|
| Locus | scaffold11510.1 : 1 ... 4670 : + |
| To GenomeBrowser | scaffold11510.1:1..4670 |
| Genes list of scaffold | scaffold11510.1 |
| Synonym | pfu_aug1.0_20507.1_47390 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| excitatory amino acid transporter partial | GO:0005314 GO:0005743 GO:0006537 GO:0006836 GO:0007605 GO:0009416 GO:0009449 GO:0009611 GO:0009986 GO:0010035 GO:0016021 GO:0016323 GO:0016595 GO:0017153 GO:0021545 GO:0031223 GO:0035725 GO:0042493 GO:0043025 GO:0043197 GO:0043205 GO:0043490 GO:0045202 GO:0046677 GO:0048667 GO:0050806 GO:0050885 GO:0051938 GO:0070779 GO:0089711 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11510.1_03092.t1 | 1 | 1 | SDF | 1 | 209 | 0.0 | 267.3 | 0.0 | 0.0 | 267.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11510.1_03092.t1 | gi|676477431|ref|XP_009061110.1| | hypothetical protein LOTGIDRAFT_71933, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_11510.1_03092.t1 | gi|704319118|ref|XP_010168477.1| | PREDICTED: excitatory amino acid transporter 1, partial [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_11510.1_03092.t1 | gi|694861015|ref|XP_009472346.1| | PREDICTED: excitatory amino acid transporter 1, partial [Nipponia nippon] | 0.0 |
| pfu_aug2.0_11510.1_03092.t1 | gi|704585271|ref|XP_010189737.1| | PREDICTED: excitatory amino acid transporter 1, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_11510.1_03092.t1 | gi|733924881|ref|XP_010723644.1| | PREDICTED: excitatory amino acid transporter 1 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11510.1_03092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11510.1_03092.t1 gtactcgcctattggtatcctgttcttggtggcggctaaggtggttgagatggaggatccggagaagacgtttgagcagc tgatgtactatttcatcacagtgatgacgggactgataatccacggctttatcactctacccatgctgtacctcgtcata gtcaggaggaacccatacaagtacatatacggtgtagtccaggcattagtgacggcactaggtacatcgtccagttcagc tacactgccagttacaatgcgctgtttggaggacaataacggtgtagatagcaggataaccaagtttgtggctcctgttg gggccaccataaacatggacgggaccgcgctatacgaggcggtggctgtactatttataggacaggtcagaggattcgac ctgggtataggagaaatcattactgtcagcattacggccactgcagctgcaataggagccgcaggcgtcccacaagctgg cttagttaccatggttatagttcttacagctgtcggtttccccacggatgacgtcacgctagtcctggctatagactggt tattagatcgtttccgtacaatggtaaatgtattaggagacgctatcggggctggtattgtttatcatctgtcacagaag gagctggataacatggaccgtcaggatgtagaactacagaaaccaaagtcaggaatggacaatgtagcattcgaaggcca aagattgtaa |
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Protein
| Protein ID | pfu_aug2.0_11510.1_03092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11510.1_03092.t1 YSPIGILFLVAAKVVEMEDPEKTFEQLMYYFITVMTGLIIHGFITLPMLYLVIVRRNPYKYIYGVVQALVTALGTSSSSA TLPVTMRCLEDNNGVDSRITKFVAPVGATINMDGTALYEAVAVLFIGQVRGFDLGIGEIITVSITATAAAIGAAGVPQAG LVTMVIVLTAVGFPTDDVTLVLAIDWLLDRFRTMVNVLGDAIGAGIVYHLSQKELDNMDRQDVELQKPKSGMDNVAFEGQ RL |
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