Gene
Gene Model ID | pfu_aug2.0_1153.1_11472 |
---|---|
Locus | scaffold1153.1 : 49907 ... 61565 : - |
To GenomeBrowser | scaffold1153.1:49907..61565 |
Genes list of scaffold | scaffold1153.1 |
Synonym | pfu_aug1.0_5553.1_09143 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
peroxiredoxin- mitochondrial-like | GO:0016491 GO:0055114 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1153.1_11472.t1 | 1 | 1 | Redoxin | 1 | 64 | 4.5e-11 | 42.4 | 3.1e-15 | 4.6e-11 | 42.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1153.1_11472.t1 | gi|390367970|ref|XP_797550.3| | PREDICTED: peroxiredoxin-5, mitochondrial [Strongylocentrotus purpuratus] | 2.0e-31 |
pfu_aug2.0_1153.1_11472.t1 | gi|410915322|ref|XP_003971136.1| | PREDICTED: peroxiredoxin-5, mitochondrial [Takifugu rubripes] | 1.0e-29 |
pfu_aug2.0_1153.1_11472.t1 | gi|657569649|ref|XP_008288320.1| | PREDICTED: peroxiredoxin-5, mitochondrial [Stegastes partitus] | 2.0e-29 |
pfu_aug2.0_1153.1_11472.t1 | gi|348526031|ref|XP_003450524.1| | PREDICTED: peroxiredoxin-5, mitochondrial-like [Oreochromis niloticus] | 2.0e-29 |
pfu_aug2.0_1153.1_11472.t1 | gi|260837161|ref|XP_002613574.1| | hypothetical protein BRAFLDRAFT_119799 [Branchiostoma floridae] | 2.0e-29 |
Transcript
Transcript ID | pfu_aug2.0_1153.1_11472.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1153.1_11472.t1 atggaggcatggggaaaagctcatgatgccacaggaaaggtacgaatgcttgccgacccagctggagaattcacgaaggc aattgattgtgcactagatgcgacagccatccttggtaatgtcagatctaaaagatactccatggttgtagaaaatggca aggtaacaaagtttaatttagaacctgacggtactggattaacgtgctctctagcacctgagattctcaaggaattgtag |
Protein
Protein ID | pfu_aug2.0_1153.1_11472.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1153.1_11472.t1 MEAWGKAHDATGKVRMLADPAGEFTKAIDCALDATAILGNVRSKRYSMVVENGKVTKFNLEPDGTGLTCSLAPEILKEL |