Gene
| Gene Model ID | pfu_aug2.0_1153.1_11473 |
|---|---|
| Locus | scaffold1153.1 : 79165 ... 98805 : - |
| To GenomeBrowser | scaffold1153.1:79165..98805 |
| Genes list of scaffold | scaffold1153.1 |
| Synonym | pfu_aug1.0_2806.1_08427 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1153.1_11473.t1 | 7 | 1 | DUF1352 | 21 | 39 | 6.7e-07 | 29.1 | 0.042 | 210.0 | 1.4 |
| pfu_aug2.0_1153.1_11473.t1 | 7 | 2 | DUF1352 | 45 | 63 | 6.7e-07 | 29.1 | 0.001 | 5.1 | 6.6 |
| pfu_aug2.0_1153.1_11473.t1 | 7 | 3 | DUF1352 | 69 | 88 | 6.7e-07 | 29.1 | 0.00029 | 1.5 | 8.4 |
| pfu_aug2.0_1153.1_11473.t1 | 7 | 4 | DUF1352 | 95 | 113 | 6.7e-07 | 29.1 | 0.00063 | 3.1 | 7.3 |
| pfu_aug2.0_1153.1_11473.t1 | 7 | 5 | DUF1352 | 119 | 137 | 6.7e-07 | 29.1 | 0.011 | 56.0 | 3.2 |
| pfu_aug2.0_1153.1_11473.t1 | 7 | 6 | DUF1352 | 143 | 161 | 6.7e-07 | 29.1 | 0.09 | 450.0 | 0.3 |
| pfu_aug2.0_1153.1_11473.t1 | 7 | 7 | DUF1352 | 167 | 185 | 6.7e-07 | 29.1 | 0.0012 | 5.8 | 6.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1153.1_11473.t1 | gi|14251053|ref|NP_116415.1| | t61 [Tupaiid herpesvirus 1] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1153.1_11473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1153.1_11473.t1 atggaccaagaagaatcaatgggacaggaccctaagaagaggaaggaaccagggaggatcagcaggacaggaccaagagt gaaaggcagtacaacgacaaacatcatgaagaggaaggaaccagggaggaatagcaggacaggacccagagtgaaaggca gtacaacgacagacatcaagaagaggaaggaaccagggaggatcagcaggacaggacccagagtgaaaggcagtacaacg acagacatcaagaagaggaagaggaaggaatcagggaggaatagcaggacaggacccagagtgaaaggcagtacaacgac agacgtcaagaagaggaaggaatcagggaggatcagcaggacaggacccagaatgaaaggcagtacaacaacagacatca tgaagaggaaggaaccagggaggatcagtggtgcaggacccagagagaaaggcagtacaacgacagacatcatgaagagg gaggagccagggaggatcagcaggacaggacccagagtgaaaggcagtacaacgacagacatcaagaagaggaagggacc agtaaggaacagtgaactgaatgaaaggcagtacaaagacagacaccaagaaaaaagggagagcacatgtgtaatccaca agcctaaacttgtgggttaa |
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Protein
| Protein ID | pfu_aug2.0_1153.1_11473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1153.1_11473.t1 MDQEESMGQDPKKRKEPGRISRTGPRVKGSTTTNIMKRKEPGRNSRTGPRVKGSTTTDIKKRKEPGRISRTGPRVKGSTT TDIKKRKRKESGRNSRTGPRVKGSTTTDVKKRKESGRISRTGPRMKGSTTTDIMKRKEPGRISGAGPREKGSTTTDIMKR EEPGRISRTGPRVKGSTTTDIKKRKGPVRNSELNERQYKDRHQEKRESTCVIHKPKLVG |
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