Gene
| Gene Model ID | pfu_aug2.0_1153.1_11476 |
|---|---|
| Locus | scaffold1153.1 : 152631 ... 168405 : - |
| To GenomeBrowser | scaffold1153.1:152631..168405 |
| Genes list of scaffold | scaffold1153.1 |
| Synonym | pfu_aug1.0_6246.1_52731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1153.1_11476.t1 | 3 | 1 | START | 58 | 118 | 1.8e-07 | 30.7 | 0.12 | 610.0 | -0.5 |
| pfu_aug2.0_1153.1_11476.t1 | 3 | 2 | START | 196 | 217 | 1.8e-07 | 30.7 | 0.14 | 700.0 | -0.7 |
| pfu_aug2.0_1153.1_11476.t1 | 3 | 3 | START | 518 | 648 | 1.8e-07 | 30.7 | 8.0e-10 | 3.9e-06 | 26.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1153.1_11476.t1 | gi|676479090|ref|XP_009061635.1| | hypothetical protein LOTGIDRAFT_234975 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1153.1_11476.t1 | gi|524883959|ref|XP_005098605.1| | PREDICTED: uncharacterized protein LOC101845400 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1153.1_11476.t1 | gi|585682304|ref|XP_006812218.1| | PREDICTED: uncharacterized protein LOC102809355 [Saccoglossus kowalevskii] | 1.0e-39 |
| pfu_aug2.0_1153.1_11476.t1 | gi|390333488|ref|XP_782132.2| | 2.0e-33 | |
| pfu_aug2.0_1153.1_11476.t1 | gi|585645169|ref|XP_006811515.1| | PREDICTED: probable GPI-anchored adhesin-like protein PGA55-like [Saccoglossus kowalevskii] | 7.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_1153.1_11476.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1153.1_11476.t1 atgttattgtatttactttcggtgtctgctctgtgcttctgtttgattcttatcgtactgctgaaatattctccattgaa acatttgtcaagaaatcaacaggatgatgtgcagtttggtgcgaccgaatttctcaaattaatcaagaagcaaaagatct tgccagtaggaacacagaaaggatggagaaattattcatgtcacaacgccagtaagatatggatacgaaagcttttctct gaaaaagatgaaacaactgtacaactattcgctaccataactaaattaccagcttcttgtcaggtggtgtaccaagtttt acgtgatgtgacaaagagatgtgaatggaggcctggcacggacggggcttccaatgtcggtacagaaaggtcagggggag gatccaagaagggtggatcatggatggataccaatgtaggtcaggatgtcctcgtggaaaccgttttcgataattcctcg gcgtacgttgtgcagactgtacagagacagtgtagaagattttggtttcgagaagaaaatggttgctgttgggtggccga gtctgaggtcggcaaaagtgataactcattttacctcatacaaccactagaagatgtagagcaatgcctactgaccatag taagtcacatgtcgtatcccttcagcattgacgacaacgtacagaaattatcatcgatcagtttatccgtcctagatcta tttactcagagaaaactgcgggcgacgcccctgatcgatattagattgccttccaaacattcacatcacctgtttagaga cccggatttagaaaatttatcgtcatccgaggaagagacggagaaagatgttttttccgtaaaattctccaatctgaatc ctcaggaacgcaatgtaatattgcagaggtcagagtctatccttaaactttcaaaaccgtcatcgaaaggtcgcacgaac actttgtccgacagtaactcgcgtgacttgtctgggagcgatagatctcgtccaagagcaaaaacgcatccagcatccac gccgaacggaaatgtcttgccagaaaagaatttgccaaatggaaatacagagaaagattgttcttcccaaaatgtagccg aagtggagtcttccaagcgtgaagaaagggacgtgaaaaatgctcaaagtcaaaatggttgtgttcctaacgttacaaag acggaagtcaataaaccacgtgaagttgtttatacaagtttcacggattctgatgttagtgatttatctagtcaagaaaa taaagacgcggatgatagaggggttgttaaaggagataaacaagcgctgaatgaaaatgcagtaaaatacacaacactag caaaccaggtggcagcagaattactggcccttgttgtccgagtgtccaacttagatttaagatctcccattcaggttcag caagaaacaacaggtggatggatgttctgtggattggagaatgatatagtcattattaagaggcattatcacaatataaa cctgtgtggaagttatatagggaagggtatcatccaggccccgccccaaagtgtgatggatgtgattaaaaaccctagga ccagatttacctatgatgagagcctgaaggaggttcaagtgcttgaagagatctcagataaaataaagatagtgtattac agacacgagatactacacatgtttaagaggatagagtacgacttcaccatcatacagagtgagcgcggggacggagagaa actagtactgtccatggaaactgttgacacaggggttcccattccctcaggggtcaacagagtcaagatgatgacaagcg gttggatcatagaaccaataaccaaggagaaccgtctttactccatggttacctacgtcatgcaaatgaactttggcctt tgctcccaaactgctgctgagaaatcgctgatcgaagaaatggtctctaagcaaccgcttagcatcgcccatctccgtca gtatttacgtccaacaatggcaataagtcgtcaaatgtcgacatcatctccaaacagaacaaagaaggattag |
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Protein
| Protein ID | pfu_aug2.0_1153.1_11476.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1153.1_11476.t1 MLLYLLSVSALCFCLILIVLLKYSPLKHLSRNQQDDVQFGATEFLKLIKKQKILPVGTQKGWRNYSCHNASKIWIRKLFS EKDETTVQLFATITKLPASCQVVYQVLRDVTKRCEWRPGTDGASNVGTERSGGGSKKGGSWMDTNVGQDVLVETVFDNSS AYVVQTVQRQCRRFWFREENGCCWVAESEVGKSDNSFYLIQPLEDVEQCLLTIVSHMSYPFSIDDNVQKLSSISLSVLDL FTQRKLRATPLIDIRLPSKHSHHLFRDPDLENLSSSEEETEKDVFSVKFSNLNPQERNVILQRSESILKLSKPSSKGRTN TLSDSNSRDLSGSDRSRPRAKTHPASTPNGNVLPEKNLPNGNTEKDCSSQNVAEVESSKREERDVKNAQSQNGCVPNVTK TEVNKPREVVYTSFTDSDVSDLSSQENKDADDRGVVKGDKQALNENAVKYTTLANQVAAELLALVVRVSNLDLRSPIQVQ QETTGGWMFCGLENDIVIIKRHYHNINLCGSYIGKGIIQAPPQSVMDVIKNPRTRFTYDESLKEVQVLEEISDKIKIVYY RHEILHMFKRIEYDFTIIQSERGDGEKLVLSMETVDTGVPIPSGVNRVKMMTSGWIIEPITKENRLYSMVTYVMQMNFGL CSQTAAEKSLIEEMVSKQPLSIAHLRQYLRPTMAISRQMSTSSPNRTKKD |
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