Gene
| Gene Model ID | pfu_aug2.0_1153.1_11477 |
|---|---|
| Locus | scaffold1153.1 : 174467 ... 179795 : - |
| To GenomeBrowser | scaffold1153.1:174467..179795 |
| Genes list of scaffold | scaffold1153.1 |
| Synonym | pfu_aug1.0_10058.1_46144 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1153.1_11477.t1 | 1 | 1 | RVT_1 | 586 | 746 | 9.0e-13 | 48.0 | 3.6e-16 | 1.8e-12 | 47.1 |
Transcript
| Transcript ID | pfu_aug2.0_1153.1_11477.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1153.1_11477.t1 atggctacatcattagtgagcagtgaagattccaaaatcatgataaactttgcagaatcattggaagtgcggaaattgcc gtctgtaggagaatccacggcaaagaagatcattgaataccgagttaaagtaggtaccatcacaagggatacaattggag atataagaaatgtaaaggtaacagttgaatcattggaaatgattgattttgcagaaaatcccgatttgcacgttccaacg gtcgcttctgatacaagcatgaatacaactacttcaagttctagtagtgatcatgatagatctgtagatccgaataaatc tatagatcagactgaagatctgattaataaaatcagtgggttaattattgacaaaaatgaagatcatagtgcatcatctg ccgataccaggtcaaacccatcaaaacccagtgccaaaccattccctaacccgtggcaaatgttccagtatccaaatcag ccaaatatgcagaatggcatgccaggtatgtttaatacatggacatataatatgtcatatggaatgctatcgccaggaca attttggcaacctaatccaaatttagggtatcaaggttttcaaaatccaggtaatatgaatcagggaattttgaccccag tcaattttggtaacaaaaatttaggtcaacaaccaggtaacctgaatttaggacaacaaccagctaccgtgaatttagga ccagaaccaggtgtgaaccgccaaagaagaaatagacgaaatgcacaaggtaatcaaggtcaacaaggattgcctttacc aggacaagggaaccaaggtcacccagctatgcaacctaatcaacaacctggaatgcaatttaataacaaccaaggccaag gaattcaaggattgccaggacagattaatcaaggtcaagatcaaggattccaaaaccaaggagcccaaggacaagtacta ggacaaggaaaccaaggaaatggtaacctagcacagggaaaccaaggaaatggtaaccaggttgcaaacagaaggatatt acaacggcaacaaaatgagcccattcccaaaggattgaagtatgatgggaaagaacactggttaggcttcaaacacaagt ttcttcgttacaaaaactcgcgcaactggacagacgaagaagcaagggaccaattatgttacttcttggaatcaaaagca acagaccaaccattgaaagaaggaaattatctgatagaacccaatgtgaaaacattacttgctccacgtgtttgtatcga gataagcaaggcaccagttatgtcgttcgtccacatctcagacaataatgtgacacttttcaaaaatcagaaagtaggtc acctttatgaaattgatgaaatcgtaccagattcaaacacttcatccaacgatattgtttacgtatctaaagtgaataaa caagatgaattgccagagcatctcaaagacttataccagcgctcgtgtacaggtttaagcgagtcagaacaaagtgggct aaaatccttattaataaattattctgacgtattttcatcacacgagtatgatattggcagtttcacagcaatagagcatt ccatcgacactggtgacgctaaaccaatcaaacaacggtttcgacgaacaccaatttgctttgaaggcgaggcagagaaa cagatagagaagatgattaaggctgatgttattgagccatccgtatcagaatgggctttctcaccagttttagtaaggaa aagggatggaagtgtcaggtggtgtgtgggctatagggccgtcaacaatgtgacaaagaaagatgtctttcccttaccct tagtagaggagtgtatggataccttatcagataatatatggttttccaaactagatgctacctgggggtacatgtatcgg cagattaaggtgaaggaagaggataagtgcaaaacagctttcttgacaaaattcgggctctaccagttcaagcgtatgag tttcggcttgacgaatgctcctagtaccttttccagggtcatgaacttagtaatcagaggtctaaactggaaaatcgtat tggcttttttggatgaggtgttagttttgggacgagacattaacgatcatatcaaaaatcttgcagaagtcttcactcgc ctaagacaatacgggataaaactgaaagccaagaagtgtgacctatttcgccaggaagttgagtatcttggtagaacagt aggccgagacggaatgaaggtaagtcagtcttttattgatactatggccaattggacagttctcacaagcaccaaagaag tggaatgcttttgcgggtttgcaaattaccaccggagctttatcaaagactttgccaatatttcagcaccgttctatggt ctcactggaaaaaacaaattatgttgggaagaacaacatcaggacgcattcgacaaattgaagagtgccttaatgcaagc gccagtcctttcaattctcaatcaggaaggaacaatcatcctagatactgacgcatcagacttcgctataggagctgagt tatcacaaatacagactgatcacagtagtctccagtggctgatgaatttcaagtatccacaaggccaacttgccagatgg ttggaggaattgagccaatactggatgatcatacgccatcgaccaggtataaagcacaaaaaggcagatgctctatctag gatgcctgaaatatcggcttgctcagagtatcgcaaccatgtagaacctaaagaactttcttgtggtggttgtcagtatt gtgtaaagagacacaaagattggagccattttatcgaaacagtggacgacgccggaatgtggtacaacaagtggacgaag ccggaatgtggtacaacaagttacaacaccgttatcttggattaa |
|
Protein
| Protein ID | pfu_aug2.0_1153.1_11477.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1153.1_11477.t1 MATSLVSSEDSKIMINFAESLEVRKLPSVGESTAKKIIEYRVKVGTITRDTIGDIRNVKVTVESLEMIDFAENPDLHVPT VASDTSMNTTTSSSSSDHDRSVDPNKSIDQTEDLINKISGLIIDKNEDHSASSADTRSNPSKPSAKPFPNPWQMFQYPNQ PNMQNGMPGMFNTWTYNMSYGMLSPGQFWQPNPNLGYQGFQNPGNMNQGILTPVNFGNKNLGQQPGNLNLGQQPATVNLG PEPGVNRQRRNRRNAQGNQGQQGLPLPGQGNQGHPAMQPNQQPGMQFNNNQGQGIQGLPGQINQGQDQGFQNQGAQGQVL GQGNQGNGNLAQGNQGNGNQVANRRILQRQQNEPIPKGLKYDGKEHWLGFKHKFLRYKNSRNWTDEEARDQLCYFLESKA TDQPLKEGNYLIEPNVKTLLAPRVCIEISKAPVMSFVHISDNNVTLFKNQKVGHLYEIDEIVPDSNTSSNDIVYVSKVNK QDELPEHLKDLYQRSCTGLSESEQSGLKSLLINYSDVFSSHEYDIGSFTAIEHSIDTGDAKPIKQRFRRTPICFEGEAEK QIEKMIKADVIEPSVSEWAFSPVLVRKRDGSVRWCVGYRAVNNVTKKDVFPLPLVEECMDTLSDNIWFSKLDATWGYMYR QIKVKEEDKCKTAFLTKFGLYQFKRMSFGLTNAPSTFSRVMNLVIRGLNWKIVLAFLDEVLVLGRDINDHIKNLAEVFTR LRQYGIKLKAKKCDLFRQEVEYLGRTVGRDGMKVSQSFIDTMANWTVLTSTKEVECFCGFANYHRSFIKDFANISAPFYG LTGKNKLCWEEQHQDAFDKLKSALMQAPVLSILNQEGTIILDTDASDFAIGAELSQIQTDHSSLQWLMNFKYPQGQLARW LEELSQYWMIIRHRPGIKHKKADALSRMPEISACSEYRNHVEPKELSCGGCQYCVKRHKDWSHFIETVDDAGMWYNKWTK PECGTTSYNTVILD |
|