Gene
| Gene Model ID | pfu_aug2.0_1158.1_28099 |
|---|---|
| Locus | scaffold1158.1 : 154671 ... 161645 : - |
| To GenomeBrowser | scaffold1158.1:154671..161645 |
| Genes list of scaffold | scaffold1158.1 |
| Synonym | pfu_aug1.0_2573.1_44416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1158.1_28099.t1 | 2 | 1 | CBM_14 | 41 | 82 | 3.6e-11 | 42.8 | 6.9e-11 | 1.0e-06 | 28.5 |
| pfu_aug2.0_1158.1_28099.t1 | 2 | 2 | CBM_14 | 92 | 130 | 3.6e-11 | 42.8 | 4.7e-08 | 0.00069 | 19.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1158.1_28099.t1 | gi|676447669|ref|XP_009051483.1| | hypothetical protein LOTGIDRAFT_152717 [Lottia gigantea] | 1.0e-09 |
| pfu_aug2.0_1158.1_28099.t1 | gi|524878723|ref|XP_005096043.1| | PREDICTED: protein PIF-like [Aplysia californica] | 5.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_1158.1_28099.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1158.1_28099.t1 atgattccacagatgtgtctctttgtatttttcttgaatatatcgccagtctaccttaattacaatgcaggggatgacga tagcaaagactgtttctgtggaagagatatatgctttgaatctgtacaaggggactgcacaaagtatatccaatgtacaa gcgtagatggacaagtatttagacgggaaattcaatgtccatatggcctattttgggacagtccaacggaatcttgcaga acgtcattgactgtcaatttttccgaagatccttgcaggaatgcacctaatggctattccttcgtaacgctcaatatggg ttgccgtgcatactgggtttgcataaatggtcgaagtatactaagctgctgtcctctcggatcgacatatgtctccggat taggatgtataaatagtcccgaatgcaacgatccgtgtccgcctagaaaatag |
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Protein
| Protein ID | pfu_aug2.0_1158.1_28099.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1158.1_28099.t1 MIPQMCLFVFFLNISPVYLNYNAGDDDSKDCFCGRDICFESVQGDCTKYIQCTSVDGQVFRREIQCPYGLFWDSPTESCR TSLTVNFSEDPCRNAPNGYSFVTLNMGCRAYWVCINGRSILSCCPLGSTYVSGLGCINSPECNDPCPPRK |
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