Gene
| Gene Model ID | pfu_aug2.0_116.1_20276 |
|---|---|
| Locus | scaffold116.1 : 401765 ... 421235 : - |
| To GenomeBrowser | scaffold116.1:401765..421235 |
| Genes list of scaffold | scaffold116.1 |
| Synonym | pfu_aug1.0_2.1_14624 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_116.1_20276.t1 | 1 | 1 | Fibrinogen_C | 99 | 279 | 9.6003e-42 | 143.1 | 1.4013e-45 | 1.49995e-41 | 142.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_116.1_20276.t1 | gi|557321316|ref|XP_006033775.1| | PREDICTED: angiopoietin-2-like [Alligator sinensis] | 6.0e-33 |
| pfu_aug2.0_116.1_20276.t1 | gi|564262158|ref|XP_006269960.1| | PREDICTED: angiopoietin-2-like [Alligator mississippiensis] | 2.0e-32 |
| pfu_aug2.0_116.1_20276.t1 | gi|326911175|ref|XP_003201937.1| | PREDICTED: fibroleukin [Meleagris gallopavo] | 3.0e-32 |
| pfu_aug2.0_116.1_20276.t1 | gi|697467051|ref|XP_009667740.1| | PREDICTED: fibroleukin [Struthio camelus australis] | 7.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_116.1_20276.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_116.1_20276.t1 atgtattcaattttgccaatccttatagtttttggcgggtatgaaccgattaatgcccagtatcttcccccattcaatac ctgccctgcagccaaattcatagaaaatataaggcagttatatctaaagaaatattgggaaattgccgttttaaagaaac tctatgaagaaaagcagatagaggcagaaaaagatagagtgactctgcagatggaaatgaactcaacagttgaacagctt cagcggcgaaacgatcgattaaatggtttggtagaccaaacaaaagtaactgtaagagattgcatgtggtacatgattga agacattgacgcaaagagtggagtgtataatttgtcagtgaacggcgtcaatgttacagcatattgcgatatggaaactg cctcagggggatggacaactatttttgcaagagatgaatcaaagaccaataacttcacaagatcatggaacgaatataaa ataggattcgggagtgtacctgataactactggataggaaatgagataatgcatgaattcacaaaagaccgaccttccga agtgtacttcaaactaacagacgacaaaaatataacgaagtgggcaaaataccaaaattttacgatcggatcagaggagg aaaaattcattctgaatgtcaatgacgactcttatgaaggaacagcaggtgacgcagtagtttatggcaagagtcatttt tggtcggcgaacagaatggctttcagcacgtatgatatggataatgacaggtataaggagggtaattgtgcggatggcgg atggtggatgaatagatgtggagtatcaacacttactaatcctgcaatgtggtggatggaaaccatagtagactatggat tcgcaaaaccgcgagatgatctaaggaaagtggcaatgatgatacgattttga |
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Protein
| Protein ID | pfu_aug2.0_116.1_20276.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_116.1_20276.t1 MYSILPILIVFGGYEPINAQYLPPFNTCPAAKFIENIRQLYLKKYWEIAVLKKLYEEKQIEAEKDRVTLQMEMNSTVEQL QRRNDRLNGLVDQTKVTVRDCMWYMIEDIDAKSGVYNLSVNGVNVTAYCDMETASGGWTTIFARDESKTNNFTRSWNEYK IGFGSVPDNYWIGNEIMHEFTKDRPSEVYFKLTDDKNITKWAKYQNFTIGSEEEKFILNVNDDSYEGTAGDAVVYGKSHF WSANRMAFSTYDMDNDRYKEGNCADGGWWMNRCGVSTLTNPAMWWMETIVDYGFAKPRDDLRKVAMMIRF |
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